Co-expression analysis

Gene ID Zm.8147.1.A1_at
Gene name hypothetical protein LOC100273624
Homology with ArabidopsisSimilar to At2g15830: unknown protein (HF=5e+0)
Module size 8 genes
NF 0.50
%ile 64.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.94Zm.8147.1.A1_atBM073080hypothetical protein LOC100273624-5e+0At2g15830unknown proteinO.I.H.G.S.X.
0.6785.80.95Zm.13502.1.A1_atCA403391hypothetical protein LOC100191398-9e-4At2g35060KUP11O.I.H.G.S.X.
0.6785.80.96Zm.8528.1.S1_atBM074548THAP domain-containing protein 4-2e+0At1g79260unknown proteinO.I.H.G.S.X.
0.6179.50.95Zm.1013.1.S1_atCD436268nucleic acid binding protein-4e+0At5g56910-O.I.H.G.S.X.
0.5267.30.94Zm.10728.1.A1_atBQ539251--4e+0At2g10557unknown proteinO.I.H.G.S.X.
0.4759.90.96Zm.9169.2.S1_x_atCO521754hypothetical protein LOC100194136-9e-10At2g47970NPL4 family proteinO.I.H.G.S.X.
0.3641.30.94Zm.1250.2.A1_atAY104390.1Hypothetical protein LOC100191515-6e+0At5g17010sugar transporter family proteinO.I.H.G.S.X.
0.3029.80.95Zm.14916.4.S1_a_atBM078301hypothetical protein LOC100193596 /// ubiquitin-conjugating enzyme E2-21 kDa 1-1e-20At2g46030UBC6 (ubiquitin-conjugating enzyme 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.599.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.399.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.398.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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