Co-expression analysis

Gene ID Zm.813.2.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g14160: transport protein, putative (HF=5e-15)
Module size 9 genes
NF 0.33
%ile 33.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.50.93Zm.813.2.A1_atAY103619.1--5e-15At4g14160transport protein, putativeO.I.H.G.S.X.
0.5065.70.96Zm.869.2.S1_atAI711751Hypothetical protein LOC100192365-6e+0At5g15560unknown proteinO.I.H.G.S.X.
0.4251.30.97Zm.16049.2.A1_atCF042888--3e-4At5g0385040S ribosomal protein S28 (RPS28B)O.I.H.G.S.X.
0.4048.50.93Zm.4004.1.S1_atAY122274.1histone acetyl transferase MYST family 101-1e-101At5g64610HAM1 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 1)O.I.H.G.S.X.
0.3336.00.97Zm.9839.1.A1_atBM339393Hypothetical protein LOC100193033-3e+0At2g17300unknown proteinO.I.H.G.S.X.
0.3131.60.96Zm.5412.1.A1_atCF635537hypothetical protein LOC100280167-3e-6At4g02630protein kinase family proteinO.I.H.G.S.X.
0.1912.80.96Zm.1194.1.S1_atCA403262fasciclin-like arabinogalactan protein 10-2e-1At5g52930unknown proteinO.I.H.G.S.X.
0.136.80.95Zm.8986.1.A1_atBM073419dihydroflavonol-4-reductase-1e-7At5g58490cinnamoyl-CoA reductase familyO.I.H.G.S.X.
0.115.30.94ZmAffx.1015.1.S1_atAI881467Protein kinase catalytic domain-2e-1At2g19820LBD9 (LOB DOMAIN-CONTAINING PROTEIN 9)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.496.2GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.396.1GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.095.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.895.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.494.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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