Co-expression analysis

Gene ID Zm.8094.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g50720: protein kinase, putative (HF=2e+0)
Module size 6 genes
NF 0.04
%ile 2.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.92Zm.8094.1.A1_atBM266491--2e+0At3g50720protein kinase, putativeO.I.H.G.S.X.
0.1912.80.92Zm.1821.1.A1_atBG840732--9e-1At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.158.60.93Zm.4097.1.A1_atBG266571hypothetical protein LOC100280288-3e+0At5g48890transcription factorO.I.H.G.S.X.
0.125.90.93Zm.19297.1.A1_atCO524882hypothetical protein LOC100193577-2e-2At3g49800BSD domain-containing proteinO.I.H.G.S.X.
0.020.70.91Zm.2157.5.A1_x_atCK348105ribosomal protein S11-2e-35At5g23740RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)O.I.H.G.S.X.
0.010.30.92Zm.19001.1.A1_atAY108422.1--3e-6At3g01540DRH1 (DEAD BOX RNA HELICASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.098.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.16937.1.A1_at, orthologous to the query gene, Zm.8094.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.6TaAffx.16937.1.A1_atAt3g50720--1e+0At3g51680short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.1922.4Ta.3257.1.S1_atAt3g50720--3e+0At2g30933-O.I.H.G.S.X.
0.1821.0TaAffx.84283.1.S1_atAt3g50720--4e+0At1g32760glutaredoxin family proteinO.I.H.G.S.X.
0.1719.8TaAffx.128418.47.A1_atAt3g50720--1e+0At1g80133unknown proteinO.I.H.G.S.X.
0.1618.2TaAffx.105995.1.S1_atAt3g50720--4e+0At3g24810ICK3O.I.H.G.S.X.
0.1618.2Ta.16550.1.S1_atAt3g50720--2e-1At4g10620-O.I.H.G.S.X.
0.1517.1TaAffx.46930.1.S1_atAt3g50720--7e+0At4g22650-O.I.H.G.S.X.
0.1112.4TaAffx.92344.2.S1_s_atAt3g50720--1e-1At5g50510-O.I.H.G.S.X.
0.1011.3Ta.9103.2.S1_atAt3g50720--4e+0At5g53270seed maturation family proteinO.I.H.G.S.X.
0.0910.4Ta.1756.1.A1_atAt3g50720--1e+1At3g21580cobalt ion transmembrane transporterO.I.H.G.S.X.
0.089.4Ta.26052.1.A1_atAt3g50720--2e-3At5g54080HGO (HOMOGENTISATE 1,2-DIOXYGENASE)O.I.H.G.S.X.
0.067.6Ta.9786.1.S1_atAt3g50720--3e-2At1g59990DEAD/DEAH box helicase, putative (RH22)O.I.H.G.S.X.
0.056.7TaAffx.34286.1.S1_atAt3g50720--3e-2At1g18380-O.I.H.G.S.X.
0.056.7Ta.16754.1.S1_atAt3g50720--1e+0At4g37710VQ motif-containing proteinO.I.H.G.S.X.
0.045.8Ta.25935.1.A1_atAt3g50720--2e-2At5g01490CAX4 (CATION EXCHANGER 4)O.I.H.G.S.X.
0.045.8TaAffx.31134.1.S1_atAt3g50720--8e-1At1g31319unknown proteinO.I.H.G.S.X.
0.034.7Ta.29300.1.S1_atAt3g50720--7e-1At3g06120MUTE (MUTE)O.I.H.G.S.X.
0.034.7TaAffx.70620.1.S1_atAt3g507201-aminocyclopropane-1-carboxylate synthase-6e-3At4g08040ACS11O.I.H.G.S.X.
0.023.6TaAffx.528.1.S1_atAt3g50720--2e+0At3g56520no apical meristem (NAM) family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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