Co-expression analysis

Gene ID Zm.8094.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g50720: protein kinase, putative (HF=2e+0)
Module size 6 genes
NF 0.04
%ile 2.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.92Zm.8094.1.A1_atBM266491--2e+0At3g50720protein kinase, putativeO.I.H.G.S.X.
0.1912.80.92Zm.1821.1.A1_atBG840732--9e-1At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.158.60.93Zm.4097.1.A1_atBG266571hypothetical protein LOC100280288-3e+0At5g48890transcription factorO.I.H.G.S.X.
0.125.90.93Zm.19297.1.A1_atCO524882hypothetical protein LOC100193577-2e-2At3g49800BSD domain-containing proteinO.I.H.G.S.X.
0.020.70.91Zm.2157.5.A1_x_atCK348105ribosomal protein S11-2e-35At5g23740RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)O.I.H.G.S.X.
0.010.30.92Zm.19001.1.A1_atAY108422.1--3e-6At3g01540DRH1 (DEAD BOX RNA HELICASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.098.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os07g0118200, orthologous to the query gene, Zm.8094.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8796.6Os07g0118200At3g50720-Protein of unknown function DUF538 family protein3e-1At5g18310unknown proteinO.I.H.G.S.X.
0.3745.0Os05g0473900At3g50720-Phytanoyl-CoA dioxygenase family protein4e+0At2g13960myb family transcription factorO.I.H.G.S.X.
0.2931.1Os11g0118800At3g50720-Hypothetical protein5e-8At5g01970unknown proteinO.I.H.G.S.X.
0.2831.1Os01g0921200At3g50720-Alpha-glucosidase I4e-13At1g24320alpha-glucosidase, putativeO.I.H.G.S.X.
0.2831.1Os07g0641600At3g50720-SAM (and some other nucleotide) binding motifdomain containing protein2e-7At2g26810unknown proteinO.I.H.G.S.X.
0.2831.1Os01g0557400At3g50720-Cyclin-like F-box domain containing protein9e-1At2g35640hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2625.6Os03g0286800At3g50720-WD and tetratricopeptide repeats protein 1. Spliceisoform 42e-1At3g45620transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2625.6Os06g0303700At3g50720-Myb, DNA-binding domain containing protein3e-1At4g22756SMO1-2 (STEROL C4-METHYL OXIDASE 1-2)O.I.H.G.S.X.
0.2422.4Os01g0838400At3g50720-Hypothetical protein5e-2At1g76670transporter-relatedO.I.H.G.S.X.
0.2321.2Os09g0521700At3g50720-Hypothetical protein2e+0At5g22080DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2321.2Os03g0616300At3g50720-DNA-directed polymerase kappa2e-8At1g49980DNA-directed DNA polymerase/ damaged DNA bindingO.I.H.G.S.X.
0.2321.2Os03g0334000At3g50720-Ribosomal protein S6 kinase2e-42At3g08720S6K2 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2)O.I.H.G.S.X.
0.2219.4Os02g0301000At3g50720-Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein7e-8At1g01350nucleic acid binding / protein binding / zinc ion bindingO.I.H.G.S.X.
0.2117.9Os04g0524400At3g50720-Conserved hypothetical protein1e-12At5g22790RER1 (RETICULATA-RELATED 1)O.I.H.G.S.X.
0.2117.9Os05g0352700At3g50720-Zn-finger, RING domain containing protein7e+0At5g14930SAG101 (SENESCENCE-ASSOCIATED GENE 101)O.I.H.G.S.X.
0.2117.9Os09g0514100At3g50720-FAD dependent oxidoreductase family protein4e+0At5g48440oxidoreductaseO.I.H.G.S.X.
0.2016.5Os04g0564500At3g50720-Protein of unknown function DUF833 family protein2e-3At4g38260unknown proteinO.I.H.G.S.X.
0.1915.1Os01g0810600At3g50720-Protein kinase domain containing protein1e-2At1g51880leucine-rich repeat protein kinase, putativeO.I.H.G.S.X.
0.1915.1Os08g0412100At3g50720-Disease resistance protein family protein2e+0At2g28440proline-rich family proteinO.I.H.G.S.X.
0.1915.1Os10g0551100At3g50720-Conserved hypothetical protein2e+0At4g31020unknown proteinO.I.H.G.S.X.
0.1915.1Os12g0112300At3g50720--3e-20At5g05310unknown proteinO.I.H.G.S.X.
0.1915.1Os08g0401100At3g50720-Ankyrin repeat containing protein5e+0At3g31401unknown proteinO.I.H.G.S.X.
0.1813.7Os11g0584100At3g50720-Cyclin-like F-box domain containing protein2e+1At5g32597unknown proteinO.I.H.G.S.X.
0.1813.7Os08g0520400At3g50720-Conserved hypothetical protein2e+0At5g23940EMB3009 (embryo defective 3009)O.I.H.G.S.X.
0.1712.6Os05g0455900At3g50720-Protein prenyltransferase domain containingprotein6e-4At4g04370pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.1611.3Os05g0158700At3g50720-Hypothetical protein4e+0At4g10457SCRL1 (SCR-Like 1)O.I.H.G.S.X.
0.1611.3Os03g0749800At3g50720-Protein kinase3e-22At5g20930TSL (TOUSLED)O.I.H.G.S.X.
0.1611.3Os01g0229300At3g50720-Embryonic flower 1-like protein5e-1At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.1611.3Os08g0166500At3g50720-Hypothetical protein5e-2At3g09735DNA-binding S1FA family proteinO.I.H.G.S.X.
0.1510.3Os04g0469500At3g50720-Phosphofructokinase family protein3e-28At5g47810PFK2 (PHOSPHOFRUCTOKINASE 2)O.I.H.G.S.X.
0.149.3Os08g0103900At3g50720-NAM-like protein5e-1At5g62380ANAC101 (ARABIDOPSIS NAC-DOMAIN PROTEIN 101)O.I.H.G.S.X.
0.149.3Os01g0797900At3g50720-Conserved hypothetical protein2e+0At3g11030unknown proteinO.I.H.G.S.X.
0.138.2Os03g0675700At3g50720-Conserved hypothetical protein9e-2At4g38860auxin-responsive protein, putativeO.I.H.G.S.X.
0.138.2Os06g0235300At3g50720-Hypothetical protein4e-1At3g02320RNA binding / tRNA (guanine-N2-)-methyltransferaseO.I.H.G.S.X.
0.138.2Os07g0176300At3g50720-Conserved hypothetical protein2e-1At3g63230unknown proteinO.I.H.G.S.X.
0.138.2Os12g0624800At3g50720-Hypothetical protein1e+0At4g04630unknown proteinO.I.H.G.S.X.
0.127.2Os11g0558400At3g50720-Leucine-rich repeat, plant specific containingprotein2e-1At1g66830leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.063.0Os07g0103500At3g50720-2OG-Fe(II) oxygenase domain containing protein6e-2At3g614002-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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