Co-expression analysis

Gene ID Zm.807.1.A1_at
Gene name hypothetical protein LOC100216722
Homology with ArabidopsisSimilar to At4g14880: OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) (HF=5e-2)
Module size 17 genes
NF 0.51
%ile 65.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8495.80.97Zm.807.1.A1_atBG836005hypothetical protein LOC100216722-5e-2At4g14880OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)O.I.H.G.S.X.
0.6986.50.97Zm.5757.1.A1_atAI637260laccase 1-5e-4At5g01040LAC8 (laccase 8)O.I.H.G.S.X.
0.6381.10.97Zm.4845.1.S1_x_atCD442886alcohol dehydrogenase1 /// syntaxin-related protein KNOLLE-4e-5At4g03330SYP123 (SYNTAXIN OF PLANTS 123)O.I.H.G.S.X.
0.6381.10.97Zm.17087.1.S1_atBM267086nonspecific lipid-transfer protein-1e+1At3g10915reticulon family proteinO.I.H.G.S.X.
0.6179.50.97Zm.6196.2.S1_atAI677134--3e+0At5g26880tRNA/rRNA methyltransferase (SpoU) family proteinO.I.H.G.S.X.
0.5571.60.97Zm.13808.2.A1_a_atAI665043--4e-7At4g03240FH (FRATAXIN HOMOLOG)O.I.H.G.S.X.
0.5469.80.97Zm.15465.1.S1_atCD436630--6e-47At2g25660emb2410 (embryo defective 2410)O.I.H.G.S.X.
0.5369.10.97Zm.14456.2.S1_a_atCA399302allyl alcohol dehydrogenase-like protein-2e-5At2g36620RPL24A (ribosomal protein L24)O.I.H.G.S.X.
0.5065.70.97Zm.5870.1.S1_atBF729179hypothetical protein LOC100272552-1e+0At3g26147unknown proteinO.I.H.G.S.X.
0.4759.90.97Zm.9411.1.S1_atCA827391SNF1-related protein kinase regulatory subunit beta-2-4e-1At4g26150CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1)O.I.H.G.S.X.
0.4658.40.97Zm.17701.1.S1_atCK370965hypothetical protein LOC100278172-4e-1At4g19400actin bindingO.I.H.G.S.X.
0.4556.40.97Zm.5156.1.A1_atAI603750adaptin N terminal region family protein-1e-14At5g11490adaptin family proteinO.I.H.G.S.X.
0.4251.30.97Zm.6327.1.A1_atCF636380--8e-1At5g63030glutaredoxin, putativeO.I.H.G.S.X.
0.4048.50.98Zm.6784.2.A1_a_atCK347672erwinia induced protein 2 /// erwinia induced protein 2-1e-2At3g03160unknown proteinO.I.H.G.S.X.
0.3844.20.97Zm.15663.1.S1_atCD437366alpha-6-galactosyltransferase-7e-4At4g37690galactosyl transferase GMA12/MNN10 family proteinO.I.H.G.S.X.
0.3641.30.97Zm.3780.1.S1_atAW438304low-molecular-weight cysteine-rich protein LCR69-9e-2At1g47317-O.I.H.G.S.X.
0.2928.10.97Zm.13759.1.S1_atCD441609--6e-15At5g63840RSW3 (RADIAL SWELLING 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.497.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.687.4GSM375794Deep-sowing 10d treatment UCZ, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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