| Gene ID | Zm.8024.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At3g49430: SRp34a (Ser/Arg-rich protein 34a) (HF=4e-1) |
| Module size | 6 genes |
| NF | 0.08 |
| %ile | 4.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.40 | 48.5 | 0.95 | Zm.8024.1.A1_at | BM072669 | - | - | 4e-1 | At3g49430 | SRp34a (Ser/Arg-rich protein 34a) | O.I. | H.G. | S.X. | |
| 0.11 | 5.3 | 0.95 | Zm.1831.1.S1_at | BG840713 | - | - | 1e-1 | At4g21760 | BGLU47 (Beta-glucosidase 47) | O.I. | H.G. | S.X. | |
| 0.11 | 5.3 | 0.95 | Zm.12459.1.A1_at | BE186592 | - | - | 9e-6 | At3g44600 | CYP71 (CYCLOPHILIN71) | O.I. | H.G. | S.X. | |
| 0.09 | 4.0 | 0.95 | Zm.13317.1.S1_at | CA827898 | hypothetical protein LOC100277679 | - | 2e-1 | At3g55790 | unknown protein | O.I. | H.G. | S.X. | |
| 0.05 | 1.9 | 0.95 | Zm.859.1.A1_at | CF060267 | hypothetical protein LOC100191283 | - | 8e-1 | At4g28420 | aminotransferase, putative | O.I. | H.G. | S.X. | |
| 0.05 | 1.9 | 0.95 | Zm.5229.1.A1_at | CO519750 | ATP-dependent transporter ycf16 | - | 4e-24 | At3g10670 | ATNAP7 | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 10.9 | 98.5 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.9 | 98.3 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.0 | 98.2 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.5 | 98.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.0 | 97.7 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.0 | 97.7 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.2 | 97.4 | GSM162266 | Wild type 2 with array type maize from Affymetrix | GSE7030 | Phenotypic and molecular characterisation of a novel Bt2 allele in maize | |
| 5.8 | 97.2 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.4 | 97.0 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.0 | 96.7 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 87.2 | Os04g0636600 | At3g49430 | - | Conserved hypothetical protein | 1e+0 | At1g19870 | iqd32 (IQ-domain 32) | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | Os06g0677500 | At3g49430 | - | Protein prenyltransferase domain containingprotein | 1e-9 | At4g24490 | protein prenyltransferase | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | Os02g0662200 | At3g49430 | - | YbaK/prolyl-tRNA synthetase associated regiondomain containing protein | 1e-4 | At4g16510 | YbaK/prolyl-tRNA synthetase-related | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os02g0101100 | At3g49430 | - | Initiation factor 3 family protein | 1e+0 | At5g12870 | MYB46 (MYB DOMAIN PROTEIN 46) | O.I. | H.G. | S.X. | |
| 0.23 | 21.2 | Os08g0162000 | At3g49430 | - | Nonaspanin (TM9SF) family protein | 9e-35 | At2g01970 | endomembrane protein 70, putative | O.I. | H.G. | S.X. | |
| 0.23 | 21.2 | Os02g0462900 | At3g49430 | - | Prefoldin beta-like family protein | 9e-2 | At2g07340 | prefoldin-related KE2 family protein | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os02g0606100 | At3g49430 | - | Quinoprotein amine dehydrogenase, beta chain-likedomain containing protein | 6e-7 | At1g73180 | eukaryotic translation initiation factor-related | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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