Co-expression analysis

Gene ID Zm.80.1.A1_at
Gene name beta-amylase
Homology with ArabidopsisSimilar to At2g32290: BAM6 (BETA-AMYLASE 6) (HF=6e-2)
Module size 13 genes
NF 0.63
%ile 84.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.96Zm.80.1.A1_atCD972407beta-amylase-6e-2At2g32290BAM6 (BETA-AMYLASE 6)O.I.H.G.S.X.
0.7087.00.98Zm.10767.1.A1_atBQ539471short-chain dehydrogenase/reductase SDR-3e-1At2g14060S-adenosyl-L-methionine:carboxyl methyltransferase family proteinO.I.H.G.S.X.
0.7087.00.98Zm.6731.1.A1_atAI395998hypothetical protein LOC100279494-1e-14At1g50670OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.6785.80.97Zm.9356.2.A1_a_atCF626812--1e-6At1g74260PUR4 (purine biosynthesis 4)O.I.H.G.S.X.
0.6785.80.98Zm.7526.1.A1_atBM078809hypothetical protein LOC100194111-8e-2At3g02050KUP3 (K+ UPTAKE TRANSPORTER 3)O.I.H.G.S.X.
0.6785.80.99Zm.10200.2.A1_atBM078569--1e+0At5g57990UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23)O.I.H.G.S.X.
0.6481.70.98Zm.7782.1.A1_atBM079881--3e-1At5g66250kinectin-relatedO.I.H.G.S.X.
0.5976.10.97Zm.8732.1.A1_atBM347474esterase-3e+0At5g53030unknown proteinO.I.H.G.S.X.
0.5976.10.98Zm.3493.1.S1_atCF243629hypothetical protein LOC100192977-9e-25At1g13270MAP1C (METHIONINE AMINOPEPTIDASE 1B)O.I.H.G.S.X.
0.5875.10.98Zm.835.2.A1_a_atCF633042hypothetical protein LOC100191164-3e-1At2g28550RAP2.7 (RELATED TO AP2.7)O.I.H.G.S.X.
0.5775.10.98Zm.17585.2.A1_atCO521576--2e+0At4g22010sks4 (SKU5 Similar 4)O.I.H.G.S.X.
0.4455.70.98Zm.1109.1.A1_atBG266706PH domain containing protein-7e-5At2g30880pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.
0.3641.30.97Zm.765.1.A1_atBG354184hypothetical protein LOC100274097-3e+0At1g70400-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.498.4GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
9.498.3GSM253277ZM_8d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
9.298.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
7.897.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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