Co-expression analysis

Gene ID Zm.7976.1.S1_at
Gene name hypothetical protein LOC100217261
Homology with ArabidopsisSimilar to At5g37680: ATARLA1A (ADP-ribosylation factor-like A1A) (HF=2e-46)
Module size 8 genes
NF 0.46
%ile 56.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7490.30.97Zm.7976.1.S1_atBM080696hypothetical protein LOC100217261-2e-46At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)O.I.H.G.S.X.
0.5065.70.97Zm.8301.1.A1_atBM379812hypothetical protein LOC100278224-1e+0At4g21780unknown proteinO.I.H.G.S.X.
0.4352.80.97Zm.16049.2.A1_atCF042888--3e-4At5g0385040S ribosomal protein S28 (RPS28B)O.I.H.G.S.X.
0.4352.80.97Zm.3418.1.A1_atCF624427--2e+0At4g33465SCRL22 (SCR-Like 22)O.I.H.G.S.X.
0.4048.50.97Zm.8945.1.S1_atAY103889.1--2e-85At5g18580FASS (FASS 1)O.I.H.G.S.X.
0.4048.50.97Zm.13409.1.A1_atAF457934.1--6e-2At1g62640KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III)O.I.H.G.S.X.
0.3844.20.97Zm.8551.1.A1_atBM333970--2e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.2928.10.97Zm.5960.1.A1_atAI665953hypothetical protein LOC100277799-1e+1At5g65158-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.097.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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