Co-expression analysis

Gene ID	Zm.7953.1.A1_at
Gene name	acid phosphatase/vanadium-dependent haloperoxidase related
Homology with Arabidopsis	Similar to At3g21610: - (HF=7e+0)
Module size	6 genes
NF	0.14
%ile	9.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	76.1	0.93	Zm.7953.1.A1_at	BM351733	acid phosphatase/vanadium-dependent haloperoxidase related	-	7e+0	At3g21610	-	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.95	Zm.13829.1.A1_at	AY104407.1	hypothetical protein LOC100193761	-	2e-1	At5g03980	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.94	Zm.8100.3.S1_at	AY110408.1	-	-	4e-1	At4g23090	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.93	Zm.1661.1.A1_at	BM079681	50S ribosomal protein L27	-	5e-1	At1g15840	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.93	Zm.13545.1.S1_at	CF011295	-	-	6e+0	At4g29150	IQD25 (IQ-domain 25)	O.I.	H.G.	S.X.	Please select
0.03	1.1	0.93	Zm.4068.1.S1_at	CO534672	Ferredoxin-NADP reductase precursor	-	9e-16	At1g30510	ATRFNR2 (ROOT FNR 2)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.2	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.2	91.3	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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