Co-expression analysis

Gene ID Zm.793.1.A1_at
Gene name hypothetical protein LOC100280321
Homology with ArabidopsisSimilar to At2g43750: OASB (O-ACETYLSERINE (THIOL) LYASE B) (HF=4e-27)
Module size 8 genes
NF 0.34
%ile 33.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7590.80.90Zm.793.1.A1_atBM416836hypothetical protein LOC100280321-4e-27At2g43750OASB (O-ACETYLSERINE (THIOL) LYASE B)O.I.H.G.S.X.
0.4658.40.91Zm.7635.1.A1_atAW433467hypothetical protein LOC100272963-3e-15At5g58070TIL (TEMPERATURE-INDUCED LIPOCALIN)O.I.H.G.S.X.
0.4658.40.92Zm.7639.1.A1_atBM079291--1e-23At5g12190RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3336.00.93Zm.18025.1.S1_atAY521228.1osmotic stimulation MAPK-7e-2At1g18040CDKD1O.I.H.G.S.X.
0.2318.60.91Zm.17352.1.A1_atCF636500--4e+0At5g53030unknown proteinO.I.H.G.S.X.
0.2115.50.91Zm.14951.1.S1_atM36914.1cell wall protein (put.); putative-5e-3At2g30370allergen-relatedO.I.H.G.S.X.
0.2115.50.94Zm.14951.1.S1_a_atM36914.1cell wall protein (put.); putative-5e-3At2g30370allergen-relatedO.I.H.G.S.X.
0.1912.80.91Zm.18593.1.A1_atCO519699--1e+0At1g64130unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.097.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320442protocol: mRNA - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620011_at, orthologous to the query gene, Zm.793.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6787.91620011_atAt2g43750O-acetylserine(thiol)-lyase-9e-27At3g59760OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C)O.I.H.G.S.X.
0.7189.51610544_s_atAt2g43750hypothetical protein LOC100246662-1e-25At4g01150unknown proteinO.I.H.G.S.X.
0.5779.81615340_atAt2g43750similar to A_IG002N01.31 gene product-1e-30At4g01050hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.5779.81611733_s_atAt2g43750hypothetical protein LOC100240928-2e-12At1g03130PSAD-2 (photosystem I subunit D-2)O.I.H.G.S.X.
0.4464.11607497_atAt2g43750hypothetical protein LOC100259748-1e-94At5g062902-Cys Prx B (2-Cysteine peroxiredoxin B)O.I.H.G.S.X.
0.3954.91617646_atAt2g43750hypothetical protein LOC100261565-4e-26At5g16400ATF2O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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