Co-expression analysis

Gene ID Zm.7906.1.A1_at
Gene name zinc finger homeodomain protein 1
Homology with ArabidopsisSimilar to At3g28917: MIF2 (MINI ZINC FINGER 2) (HF=6e-3)
Module size 6 genes
NF 0.76
%ile 96.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.71Zm.7906.1.A1_atBM268263zinc finger homeodomain protein 1-6e-3At3g28917MIF2 (MINI ZINC FINGER 2)O.I.H.G.S.X.
0.8395.60.71Zm.910.1.A1_atCK347167--7e-13At2g45640SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)O.I.H.G.S.X.
0.7792.10.70ZmAffx.1113.1.A1_atAI600810Hypothetical protein LOC100216906-4e+0At4g33550lipid bindingO.I.H.G.S.X.
0.6785.80.73Zm.206.3.S1_x_atY09636.140S ribosomal subunit protein S21-5e-12At3g5389040S ribosomal protein S21 (RPS21B)O.I.H.G.S.X.
0.6381.10.73Zm.818.2.A1_atCO531833Hypothetical protein LOC100216560-1e+1At5g67490unknown proteinO.I.H.G.S.X.
0.5976.10.75Zm.17634.1.A1_atCK367914--9e-1At4g19270unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.598.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.85105.1.S1_at, orthologous to the query gene, Zm.7906.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.4GmaAffx.85105.1.S1_atAt3g28917--3e-4At3g28920AtHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34)O.I.H.G.S.X.
0.2735.7GmaAffx.5069.3.S1_atAt3g28917--6e-5At1g75388CPuORF5 (Conserved peptide upstream open reading frame 5)O.I.H.G.S.X.
0.2633.9GmaAffx.23239.1.S1_s_atAt3g28917bZIP transcription factor bZIP110-5e-2At4g2589060S acidic ribosomal protein P3 (RPP3A)O.I.H.G.S.X.
0.2532.6GmaAffx.35772.1.S1_s_atAt3g28917--6e+0At2g34500CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1)O.I.H.G.S.X.
0.2430.9GmaAffx.62120.1.S1_atAt3g28917--7e-9At2g34490CYP710A2 (cytochrome P450, family 710, subfamily A, polypeptide 2)O.I.H.G.S.X.
0.2025.1Gma.11060.1.A1_atAt3g28917bZIP transcription factor bZIP110-1e-4At3g62420ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53)O.I.H.G.S.X.
0.2025.1GmaAffx.14300.1.S1_s_atAt3g28917WRKY36 protein-2e-7At1g62300WRKY6O.I.H.G.S.X.
0.1721.2Gma.17138.1.S1_atAt3g28917--7e-2At5g20110dynein light chain, putativeO.I.H.G.S.X.
0.1619.7Gma.5331.4.S1_x_atAt3g28917NAC domain protein-5e-5At4g27410RD26 (RESPONSIVE TO DESICCATION 26)O.I.H.G.S.X.
0.1518.7GmaAffx.66590.2.S1_atAt3g28917--2e-5At5g57580calmodulin-binding proteinO.I.H.G.S.X.
0.1518.7Gma.10720.2.S1_x_atAt3g28917--6e-76At4g08390SAPX (STROMAL ASCORBATE PEROXIDASE)O.I.H.G.S.X.
0.1417.5GmaAffx.90047.1.S1_s_atAt3g28917--3e-4At3g28210PMZO.I.H.G.S.X.
0.1316.3PsAffx.C29000088_s_atAt3g28917--7e-1At4g16610zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.1114.2GmaAffx.22360.1.S1_atAt3g28917--6e-1At3g14670unknown proteinO.I.H.G.S.X.
0.1013.0GmaAffx.991.1.S1_atAt3g28917--2e-7At5g01340mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.1013.0Gma.2627.2.S1_atAt3g28917--7e-2At4g34120LEJ1 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1)O.I.H.G.S.X.
0.0912.0GmaAffx.87395.1.S1_atAt3g28917--2e-8At5g58970ATUCP2 (UNCOUPLING PROTEIN 2)O.I.H.G.S.X.
0.0710.2Gma.10455.1.S1_s_atAt3g28917--3e-8At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.035.8Gma.10455.1.S1_atAt3g28917--3e-8At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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