| Gene ID | Zm.7905.1.S1_at |
| Gene name | hypothetical protein LOC100193292 |
| Homology with Arabidopsis | Similar to At1g09340: CRB (CHLOROPLAST RNA BINDING) (HF=6e-15) |
| Module size | 6 genes |
| NF | 0.11 |
| %ile | 6.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.99 | Zm.7905.1.S1_at | BM078113 | hypothetical protein LOC100193292 | - | 6e-15 | At1g09340 | CRB (CHLOROPLAST RNA BINDING) | O.I. | H.G. | S.X. | |
| 0.33 | 36.0 | 0.99 | ZmAffx.282.1.S1_at | AI670410 | - | - | 3e+0 | At5g09520 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. | |
| 0.15 | 8.6 | 0.99 | ZmAffx.732.1.S1_at | AI740043 | - | - | 5e+0 | At3g16640 | TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) | O.I. | H.G. | S.X. | |
| 0.10 | 4.6 | 0.99 | Zm.8311.2.A1_a_at | BM073622 | - | - | 4e+0 | At4g23090 | unknown protein | O.I. | H.G. | S.X. | |
| 0.07 | 2.9 | 0.99 | ZmAffx.480.1.A1_at | AI677621 | transmembrane 9 superfamily protein member 4 | - | 8e-1 | At1g18871 | unknown protein | O.I. | H.G. | S.X. | |
| 0.06 | 2.3 | 0.99 | ZmAffx.536.1.S1_at | AI711796 | - | - | 1e+1 | At5g65430 | GRF8 (GENERAL REGULATORY FACTOR 8) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.4 | 97.8 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.1 | 97.7 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.1 | 97.7 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.0 | 97.7 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.4 | 97.5 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.1 | 97.4 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.9 | 97.3 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.4 | 97.0 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.4 | 97.0 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.5 | 92.6 | GSM385709 | Deep-sowing 10d treatment TIBA, biological rep1 | GSE15371 | Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 91.1 | Os12g0420200 | At1g09340 | - | 38 kDa ribosome-associated protein | 1e+0 | At1g31250 | proline-rich family protein | O.I. | H.G. | S.X. | |
| 0.86 | 96.4 | Os08g0162600 | At1g09340 | - | Rubredoxin-type Fe(Cys)4 protein family protein | 6e-22 | At5g17170 | ENH1 (enhancer of sos3-1) | O.I. | H.G. | S.X. | |
| 0.80 | 94.6 | Os08g0553800 | At1g09340 | - | Isoflavone reductase family protein | 1e-25 | At4g35250 | vestitone reductase-related | O.I. | H.G. | S.X. | |
| 0.80 | 94.6 | Os01g0912700 | At1g09340 | - | Conserved hypothetical protein | 1e-1 | At2g01340 | unknown protein | O.I. | H.G. | S.X. | |
| 0.75 | 91.9 | Os02g0764500 | At1g09340 | - | Lhca5 protein | 8e-3 | At1g45474 | LHCA5 | O.I. | H.G. | S.X. | |
| 0.73 | 91.1 | Os03g0311300 | At1g09340 | - | The start codon is not identified. | 1e-27 | At1g56500 | haloacid dehalogenase-like hydrolase family protein | O.I. | H.G. | S.X. | |
| 0.71 | 89.6 | Os07g0171100 | At1g09340 | - | TPR-like domain containing protein | 2e-16 | At1g55480 | binding / protein binding | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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