Co-expression analysis

Gene ID	Zm.7732.1.A1_at
Gene name	benzoate carboxyl methyltransferase
Homology with Arabidopsis	Similar to At3g21950: methyltransferase (HF=3e-2)
Module size	7 genes
NF	0.55
%ile	73.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.8	0.98	Zm.7732.1.A1_at	BQ538322	benzoate carboxyl methyltransferase	-	3e-2	At3g21950	methyltransferase	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.1778.1.A1_at	AW438152	hypothetical protein LOC100277199	-	7e+0	At2g20453	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.98	Zm.6779.2.S1_a_at	AY107207.1	-	-	3e+0	At4g21460	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	67.3	0.98	Zm.9720.1.A1_at	BM336624	-	-	4e+0	At5g35300	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.98	Zm.16146.1.A1_at	CF632443	hypothetical protein LOC100192115	-	3e+0	At5g47630	mtACP3 (mitochondrial acyl carrier protein 3)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.48.1.S1_at	D31905.1	mgp1 GTP-binding protein	-	6e-25	At5g60860	AtRABA1f (Arabidopsis Rab GTPase homolog A1f)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.10792.1.A1_at	AY106092.1	hypothetical protein LOC100280420	-	2e+0	At5g64905	PROPEP3 (Elicitor peptide 3 precursor)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	98.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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