Co-expression analysis

Gene ID Zm.7671.1.A1_at
Gene name hypothetical protein LOC100272470
Homology with ArabidopsisSimilar to At4g00232: unknown protein (HF=8e-2)
Module size 6 genes
NF 0.66
%ile 87.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.97Zm.7671.1.A1_atBM073122hypothetical protein LOC100272470-8e-2At4g00232unknown proteinO.I.H.G.S.X.
0.6785.80.97Zm.13185.1.A1_atAY104045.1--1e-22At3g13060-O.I.H.G.S.X.
0.6179.50.97Zm.9311.1.A1_a_atBG842505hypothetical protein LOC100274965-5e+0At2g29180unknown proteinO.I.H.G.S.X.
0.6179.50.97Zm.11636.1.A1_atBM379473--4e+0At5g07160DNA binding / transcription factorO.I.H.G.S.X.
0.5571.60.97Zm.7541.1.A1_atBM341407hypothetical protein LOC100192095-6e+0At3g43110unknown proteinO.I.H.G.S.X.
0.5065.70.97Zm.7938.1.A1_atBM079591glycosyltransferase-7e+0At5g42567-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.598.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.20514.1.A1_at, orthologous to the query gene, Zm.7671.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4766.6GmaAffx.20514.1.A1_atAt4g00232--6e-8At3g02000ROXY1O.I.H.G.S.X.
0.6786.1Gma.5155.1.A1_atAt4g00232--5e+0At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.H.G.S.X.
0.4360.6GmaAffx.2187.1.A1_atAt4g00232--4e-2At5g41530-O.I.H.G.S.X.
0.3853.3Gma.15403.1.S1_atAt4g00232--2e+0At1g16840unknown proteinO.I.H.G.S.X.
0.3346.1Gma.7583.1.S1_atAt4g00232--7e+0Atcg00770-O.I.H.G.S.X.
0.3040.4Gma.8953.1.S1_atAt4g00232--5e-2At5g15660F-box family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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