Co-expression analysis

Gene ID Zm.7671.1.A1_at
Gene name hypothetical protein LOC100272470
Homology with ArabidopsisSimilar to At4g00232: unknown protein (HF=8e-2)
Module size 6 genes
NF 0.66
%ile 87.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.97Zm.7671.1.A1_atBM073122hypothetical protein LOC100272470-8e-2At4g00232unknown proteinO.I.H.G.S.X.
0.6785.80.97Zm.13185.1.A1_atAY104045.1--1e-22At3g13060-O.I.H.G.S.X.
0.6179.50.97Zm.9311.1.A1_a_atBG842505hypothetical protein LOC100274965-5e+0At2g29180unknown proteinO.I.H.G.S.X.
0.6179.50.97Zm.11636.1.A1_atBM379473--4e+0At5g07160DNA binding / transcription factorO.I.H.G.S.X.
0.5571.60.97Zm.7541.1.A1_atBM341407hypothetical protein LOC100192095-6e+0At3g43110unknown proteinO.I.H.G.S.X.
0.5065.70.97Zm.7938.1.A1_atBM079591glycosyltransferase-7e+0At5g42567-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.598.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At4g00232, orthologous to the query gene, Zm.7671.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
1.00100.0At4g00232826492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.7586.9At1g54230841864DNA bindingF:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;PFO.I.H.G.S.X.
0.6680.1At3g44760823607unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.H.G.S.X.
0.6277.3At5g49750835038leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAVO.I.H.G.S.X.
0.6277.3At2g28090817354heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMFO.I.H.G.S.X.
0.6176.7At1g33880840285avirulence-responsive family protein / avirulence induced gene (AIG1) family proteinF:GTP binding;P:N-terminal protein myristoylation, response to bacterium;C:cellular_component unknown;MPOO.I.H.G.S.X.
0.6075.7At1g213003766773transposable element geneF:unknown;P:unknown;C:unknownO.I.H.G.S.X.
0.6075.7At3g18460821375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOO.I.H.G.S.X.
0.5974.7At5g66980836832transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:endomembrane system;PO.I.H.G.S.X.
0.5873.8At5g03000831712kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPBOVAFO.I.H.G.S.X.
0.5873.8At2g39160818501unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.5773.8At3g57960824965emsy N terminus domain-containing protein / ENT domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.5673.0At2g34280817989S locus F-box-related / SLF-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.5673.0At5g67000836835DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.O.I.H.G.S.X.
0.5469.5At1g66110842925unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.5469.5At3g45110823647unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.5469.5At3g59070825076auxin-responsive protein, putativeF:unknown;P:multicellular organismal development;C:membrane;PMFOBO.I.H.G.S.X.
0.5469.5At2g23945816927chloroplast nucleoid DNA-binding protein-relatedF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMOFO.I.H.G.S.X.
0.5469.5At1g22720838878wall-associated kinase, putativeF:protein tyrosine kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFVBO.I.H.G.S.X.
0.5368.6At2g27375817281transposable element geneF:unknown;P:unknown;C:unknownO.I.H.G.S.X.
0.5368.6At2g43450818946unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.5368.6At4g23970828497unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.5166.3At1g44980841063pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO.I.H.G.S.X.
0.5065.3At3g578203769732-F:unknown;P:unknown;C:unknownO.I.H.G.S.X.
0.4963.5At2g25360817075zinc finger protein-relatedF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVO.I.H.G.S.X.
0.4963.5At5g15060831358-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.4862.5At4g22650828361-F:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.H.G.S.X.
0.4862.5At5g58890836006AGL82 (AGAMOUS-LIKE 82)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOO.I.H.G.S.X.
0.4862.5At2g39320818517OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.H.G.S.X.
0.4862.5At1g53360841772F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.H.G.S.X.
0.4761.2At5g56770835779unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.H.G.S.X.
0.4761.2At3g45460823686zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.H.G.S.X.
0.4761.2At3g58230824992unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.4761.2At4g21240827873F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.4761.2At1g43810840978unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.4659.8At4g11490826754protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.H.G.S.X.
0.4659.8At4g21370827889S-locus protein kinase, putativeThe Col-0 pseudoSRKA allele contains a frameshift mutation that introduces a premature stop codon within the fourth of seven exons found in SRK genes. Its SCR sequences consist of several truncated pseudoSCR sequences, the longest of which is designated pseudoSCR1.O.I.H.G.S.X.
0.4659.8At3g562803769726-F:unknown;P:unknown;C:unknownO.I.H.G.S.X.
0.4659.8At3g20475821593MSH5 (MUTS-HOMOLOGUE 5)Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers.O.I.H.G.S.X.
0.4659.8At4g28130828928diacylglycerol kinase accessory domain-containing proteinF:diacylglycerol kinase activity;P:activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway;C:chloroplast;MPOBO.I.H.G.S.X.
0.4558.3At1g43680840955-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.4558.3At1g46840841118F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PO.I.H.G.S.X.
0.4457.2At3g17490821014F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.4457.2At2g21110816646disease resistance-responsive family proteinF:molecular_function unknown;P:defense response;C:endomembrane system;PO.I.H.G.S.X.
0.4457.2At5g11180830988ATGLR2.6member of Putative ligand-gated ion channel subunit familyO.I.H.G.S.X.
0.4355.3At4g11590826764F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.4355.3At1g70110843347lectin protein kinase family proteinF:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.H.G.S.X.
0.4355.3At5g28790832995transposable element geneF:unknown;P:unknown;C:unknownO.I.H.G.S.X.
0.4253.9At2g19890816508unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.4253.9At4g25920828698unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.4152.4At1g26360839178MES13 (METHYL ESTERASE 13)Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.O.I.H.G.S.X.
0.4152.4At1g59790842272cullin-relatedF:ubiquitin protein ligase binding;P:ubiquitin-dependent protein catabolic process;C:cullin-RING ubiquitin ligase complex;MFPOO.I.H.G.S.X.
0.4152.4At3g46340823779leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.H.G.S.X.
0.4152.4At5g50270835092F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.4050.8At4g13740---O.I.H.G.S.X.
0.4050.8At3g29380822598transcription factor IIB (TFIIB) family proteinF:protein binding, RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity;P:response to cadmium ion;C:transcription factor complex, nucleus;OAMFPVO.I.H.G.S.X.
0.3948.4At1g62170842513serpin family protein / serine protease inhibitor family proteinF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;MVPBOAFO.I.H.G.S.X.
0.3948.4At3g58280824997-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBO.I.H.G.S.X.
0.3846.7At4g20900827838MS5 (MALE-STERILE 5)ms5 mutants are male sterile, pollen tetrads undergo an extra round of division after meiosis II without chromosome replication, resulting in chromosome abnormalities. Gene product has some similarity to SCP1, a rat synaptonemal complex protein.O.I.H.G.S.X.
0.3846.7At3g16710820923-F:unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAO.I.H.G.S.X.
0.3643.6At5g54950835586aconitate hydratase-related / citrate hydro-lyase-related / aconitase-relatedF:molecular_function unknown;P:metabolic process;C:cellular_component unknown;MPOBO.I.H.G.S.X.
0.3541.6At5g50970835170WD-40 repeat family proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPO.I.H.G.S.X.
0.3541.6At4g35170829670-F:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.H.G.S.X.
0.3439.8At3g22770821848F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.3439.8At4g22440828339unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.3338.1At3g06280819802-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.3338.1At4g35590829711RWP-RK domain-containing proteinF:transcription factor activity;P:regulation of transcription;C:endomembrane system;POMBFAO.I.H.G.S.X.
0.3235.7At2g044903768047transposable element geneF:unknown;P:unknown;C:unknownO.I.H.G.S.X.
0.2830.3At5g52800835357DNA primaseF:DNA primase activity;P:DNA replication;C:cellular_component unknown;MOPVO.I.H.G.S.X.
0.2522.6At1g493703767414-F:unknown;P:unknown;C:unknownO.I.H.G.S.X.
0.2522.6At3g49150824076-F:molecular_function unknown;P:protein insertion into membrane;C:integral to membrane;PMFO.I.H.G.S.X.
0.1710.2At1g15600838130unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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