Co-expression analysis

Gene ID Zm.7654.1.A1_at
Gene name erg28 like protein
Homology with ArabidopsisSimilar to At2g02490: unknown protein (HF=2e+0)
Module size 21 genes
NF 0.31
%ile 28.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.30.95Zm.7654.1.A1_atBG874072erg28 like protein-2e+0At2g02490unknown proteinO.I.H.G.S.X.
0.5775.10.97Zm.12134.3.A1_a_atAI737095waxy1-2e+0At4g08691unknown proteinO.I.H.G.S.X.
0.4759.90.95Zm.6624.1.S1_atAI491254hypothetical protein LOC100192535-4e-27At4g31750WIN2 (HOPW1-1-INTERACTING 2)O.I.H.G.S.X.
0.4658.40.97Zm.6230.1.A1_atAI649825hypothetical protein LOC100279247-1e-15At2g25737unknown proteinO.I.H.G.S.X.
0.4352.80.97Zm.6702.1.A1_atBM338368hypothetical protein LOC100273003-8e-1At2g33480ANAC041 (Arabidopsis NAC domain containing protein 41)O.I.H.G.S.X.
0.4149.70.98Zm.11824.1.A1_atAY313903.1yabby9 protein-4e-12At4g00180YAB3 (YABBY3)O.I.H.G.S.X.
0.3742.30.97Zm.8373.1.S1_atBM073875--1e+0At1g72640binding / catalyticO.I.H.G.S.X.
0.3233.40.96Zm.12573.2.A1_atAY109025.1hypothetical protein LOC100192765-9e+0At5g15600SP1L4 (SPIRAL1-LIKE4)O.I.H.G.S.X.
0.3233.40.97Zm.4271.5.A1_x_atAI881217hypothetical protein LOC100191665-2e+1At3g55470C2 domain-containing proteinO.I.H.G.S.X.
0.3131.60.96Zm.6901.1.A1_atAI065598--3e+0At3g63020unknown proteinO.I.H.G.S.X.
0.3029.80.98Zm.13617.1.A1_atCF028226hypothetical protein LOC100192113-2e-10At2g47590PHR2 (photolyase/blue-light receptor 2)O.I.H.G.S.X.
0.3029.80.97Zm.4238.1.A1_atBM073006cleavage and polyadenylation specificity factor, 100 kDa subunit-8e-1At2g14282SCRL18 (SCR-Like 18)O.I.H.G.S.X.
0.3029.80.97Zm.4872.1.A1_atAI666118--8e-8At5g21150PAZ domain-containing protein / piwi domain-containing proteinO.I.H.G.S.X.
0.2928.10.97Zm.11823.1.A1_atBM381036Hypothetical protein LOC100191819-2e+1At5g41060zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.2622.70.97Zm.11077.1.A1_atBM336854--2e+1At4g03205coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putativeO.I.H.G.S.X.
0.2622.70.97Zm.13543.1.A1_atAY108273.1--2e-22At1g63160replication factor C 40 kDa, putativeO.I.H.G.S.X.
0.1912.80.96Zm.9039.1.A1_atBM078424hypothetical protein LOC100193374-5e-1At1g55310SR33O.I.H.G.S.X.
0.1912.80.97Zm.10670.1.A1_atCO529849hypothetical protein LOC100280379-1e+0At5g11410protein kinase family proteinO.I.H.G.S.X.
0.158.60.95Zm.3598.1.A1_a_atBM074908hypothetical protein LOC100191993-9e-13At5g06770KH domain-containing protein / zinc finger (CCCH type) family proteinO.I.H.G.S.X.
0.147.70.96Zm.17930.1.A1_atCK347990pollen-specific protein like-6e+0At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.H.G.S.X.
0.125.90.98Zm.3095.1.S1_atCO524214hypothetical protein LOC100192080-4e-2At5g17820peroxidase 57 (PER57) (P57) (PRXR10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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