Co-expression analysis

Gene ID	Zm.7604.1.A1_at
Gene name	hypothetical protein LOC100193443
Homology with Arabidopsis	Similar to At3g18430: calcium-binding EF hand family protein (HF=4e-1)
Module size	12 genes
NF	0.33
%ile	33.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	79.5	0.94	Zm.7604.1.A1_at	CF626298	hypothetical protein LOC100193443	-	4e-1	At3g18430	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.96	Zm.7019.1.S1_at	CF628137	hypothetical protein LOC100192047	-	1e-7	At1g73230	nascent polypeptide-associated complex (NAC) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.96	Zm.5401.1.S1_at	AI065471	pollen-specific protein C13	-	5e-1	At4g17500	ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.96	Zm.7082.2.S1_at	CO523732	hypothetical protein LOC100194344	-	1e-23	At3g05590	RPL18 (RIBOSOMAL PROTEIN L18)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.97	Zm.505.2.S1_a_at	AI665681	glucose translocator1	-	8e-1	Atcg00800	-	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.96	ZmAffx.599.1.S1_at	AI715027	-	-	3e+0	At5g48820	ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.96	Zm.13774.1.A1_at	AF457952.1	-	-	1e+1	Atmg00010	-	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.96	Zm.291.1.S1_at	AY109493.1	derlin1-1	-	2e-3	At4g29330	DER1 (DERLIN-1)	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.97	Zm.10269.1.S1_at	BM660878	-	-	4e+0	At2g05840	PAA2 (20S PROTEASOME SUBUNIT PAA2)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.96	Zm.3157.4.A1_at	AI734519	-	-	5e-1	At1g09220	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.95	Zm.5024.1.S1_at	AY111429.1	-	-	4e+0	At3g27210	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.96	Zm.4793.3.A1_a_at	CD995492	hypothetical protein LOC100193376	-	5e-3	At3g10860	ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.1	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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