Co-expression analysis

Gene ID Zm.7598.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g40510: 40S ribosomal protein S26 (RPS26A) (HF=3e-3)
Module size 6 genes
NF 0.61
%ile 82.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.7598.1.A1_atCF629653--3e-3At2g4051040S ribosomal protein S26 (RPS26A)O.I.H.G.S.X.
0.6077.80.98Zm.5305.1.A1_atCK370425ribonucleoprotein A-6e-4At2g3722029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeO.I.H.G.S.X.
0.5571.60.98Zm.3303.2.A1_atCO527646lipoxygenase-3e+0At3g22400LOX5O.I.H.G.S.X.
0.5571.60.98Zm.768.1.A1_atBG355197--3e+0At2g27750nucleolar matrix protein-relatedO.I.H.G.S.X.
0.5065.70.98Zm.4283.2.S1_atAY109824.1--4e-26At2g40290eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putativeO.I.H.G.S.X.
0.3844.20.98Zm.3169.2.S1_atCA404972hypothetical protein LOC100279753-4e-53At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.799.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.599.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.198.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.598.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.87604.1.S1_at, orthologous to the query gene, Zm.7598.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9298.9GmaAffx.87604.1.S1_atAt2g40510--9e-1At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.6181.8GmaAffx.80600.1.S1_atAt2g40510--1e-3At4g08790nitrilase, putativeO.I.H.G.S.X.
0.4463.3GmaAffx.93137.1.S1_atAt2g40510--6e-15At5g49970ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE)O.I.H.G.S.X.
0.4259.3Gma.6941.2.S1_a_atAt2g40510--2e-4At3g07950rhomboid protein-relatedO.I.H.G.S.X.
0.3548.6Gma.4155.2.S1_s_atAt2g40510EREBP/AP2 transcription factor-1e-2At1g53887unknown proteinO.I.H.G.S.X.
0.3346.1GmaAffx.93138.1.S1_s_atAt2g40510--2e-27At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.3243.7GmaAffx.59630.1.S1_x_atAt2g40510--2e-1At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.
0.3142.2GmaAffx.91636.1.S1_s_atAt2g40510--3e-63At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)O.I.H.G.S.X.
0.3040.4Gma.4037.2.S1_s_atAt2g40510--1e-16At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)O.I.H.G.S.X.
0.2939.0Gma.5720.2.S1_a_atAt2g40510--2e-5At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.2839.0GmaAffx.84653.1.S1_atAt2g40510--2e-2At5g01430Got1-like family proteinO.I.H.G.S.X.
0.2839.0GmaAffx.84244.1.S1_atAt2g40510--1e-11At5g53570RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.2839.0Gma.14354.2.S1_atAt2g40510--3e-53At5g59840Ras-related GTP-binding family proteinO.I.H.G.S.X.
0.2633.9Gma.2892.2.S1_a_atAt2g40510--5e-47At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.2532.6GmaAffx.93437.1.S1_s_atAt2g40510--3e-23At5g10780-O.I.H.G.S.X.
0.2329.9Gma.11321.3.S1_a_atAt2g40510--4e-49At1g20260hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanismO.I.H.G.S.X.
0.1822.3GmaAffx.73239.1.S1_atAt2g40510--9e-38At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.1822.3GmaAffx.38743.1.S1_atAt2g40510--4e-4At5g23340-O.I.H.G.S.X.
0.1619.7GmaAffx.29121.1.S1_atAt2g40510--1e+0At4g17310unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage