Co-expression analysis

Gene ID Zm.7548.1.A1_at
Gene name 12-oxo-phytodienoic acid reductase5
Homology with ArabidopsisSimilar to At1g76690: OPR2 (HF=5e-11)
Module size 11 genes
NF 0.41
%ile 47.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6481.70.88Zm.7548.1.A1_atBM07890312-oxo-phytodienoic acid reductase5-5e-11At1g76690OPR2O.I.H.G.S.X.
0.5571.60.93Zm.10787.1.A1_atCF625193hypothetical protein LOC100274116-2e-13At3g55000TON1A (TONNEAU 1)O.I.H.G.S.X.
0.4759.90.93Zm.1663.1.A1_atAW574480VQ motif family protein-3e+0At3g04600tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.
0.4658.40.93Zm.16308.1.S1_s_atCF015021hypothetical protein LOC100191269-8e-4At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.4048.50.93Zm.10974.1.A1_atCB350776--4e+0At1g71840transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3538.90.91Zm.12638.1.S1_atBU097459hypothetical protein LOC100216922-8e-7At2g34060peroxidase, putativeO.I.H.G.S.X.
0.3538.90.94Zm.15743.1.A1_atAW067012hypothetical protein LOC100272480-1e+1At4g03965protein binding / zinc ion bindingO.I.H.G.S.X.
0.3336.00.94Zm.15735.1.S1_atCD439760--2e+0At1g76590zinc-binding family proteinO.I.H.G.S.X.
0.2928.10.91Zm.8655.1.A1_atBM075075--5e+0At4g14540NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)O.I.H.G.S.X.
0.2724.60.93ZmAffx.406.2.A1_atAI670440--2e-1At1g74650MYB31 (MYB DOMAIN PROTEIN 31)O.I.H.G.S.X.
0.2622.70.93Zm.11617.1.A1_atBM379349--1e+0At5g03150JKD (JACKDAW)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.498.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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