Co-expression analysis

Gene ID Zm.749.1.S1_at
Gene name photosystem II subunit PsbS1
Homology with ArabidopsisSimilar to At1g44575: NPQ4 (NONPHOTOCHEMICAL QUENCHING) (HF=8e-7)
Module size 6 genes
NF 0.57
%ile 76.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.749.1.S1_atAY291061.1photosystem II subunit PsbS1-8e-7At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)O.I.H.G.S.X.
0.7389.90.98Zm.17497.1.A1_atBG266429hypothetical protein LOC100273930-3e+0Atmg00140-O.I.H.G.S.X.
0.6785.80.98Zm.6049.1.A1_atAY103705.1--1e-1At5g02400PLL2O.I.H.G.S.X.
0.5674.40.98Zm.6049.3.A1_a_atAI734480phosphatidylinositol transporter/ transporter-3e-3At1g76640calmodulin-related protein, putativeO.I.H.G.S.X.
0.4455.70.98Zm.6045.2.A1_a_atBM337093guanine nucleotide-binding protein beta subunit-like protein-2e-10At1g18080ATARCAO.I.H.G.S.X.
0.3131.60.97Zm.18416.1.A1_atCO524449hypothetical protein LOC100193203-3e-1At3g27900unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.195.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.893.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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