Co-expression analysis

Gene ID Zm.738.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g20150: unknown protein (HF=4e+0)
Module size 15 genes
NF 0.36
%ile 38.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7691.10.96Zm.738.1.A1_atAI855049--4e+0At2g20150unknown proteinO.I.H.G.S.X.
0.5674.40.97Zm.10236.1.A1_a_atCK827617hypothetical protein LOC100191555-4e-1At5g53210SPCH (SPEECHLESS)O.I.H.G.S.X.
0.4251.30.98Zm.14500.1.S1_atCO525044hypothetical protein LOC100273126-3e-16At3g14390diaminopimelate decarboxylase, putative / DAP carboxylase, putativeO.I.H.G.S.X.
0.4251.30.98Zm.166.2.A1_a_atAI664966pyruvate decarboxylase1-3e+0At5g65080MAF5 (MADS AFFECTING FLOWERING 5)O.I.H.G.S.X.
0.4149.70.98Zm.496.1.S1_atAF236370.1prohibitin3-7e-7At5g40770ATPHB3 (PROHIBITIN 3)O.I.H.G.S.X.
0.3945.60.97Zm.16594.3.A1_atCA405147--7e+0At3g21310unknown proteinO.I.H.G.S.X.
0.3641.30.98Zm.7012.9.S1_a_atBE123180hypothetical protein LOC100275729-3e+0At2g27510ATFD3 (ferredoxin 3)O.I.H.G.S.X.
0.3336.00.97Zm.5915.1.S1_atAW067416hypothetical protein LOC100272832-3e+0At5g40690-O.I.H.G.S.X.
0.2928.10.97Zm.16315.1.S1_x_atAF326488.1plasma membrane integral protein ZmPIP1-3-3e-24At3g61430PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)O.I.H.G.S.X.
0.2828.10.98Zm.7152.1.A1_atAY110483.1hypothetical protein LOC100216962-7e-5At5g47500pectinesterase family proteinO.I.H.G.S.X.
0.2828.10.98Zm.17636.1.A1_atCK368463--1e+0At5g34882-O.I.H.G.S.X.
0.2622.70.97Zm.7583.1.A1_atBM339440--2e+1At5g57181unknown proteinO.I.H.G.S.X.
0.2622.70.98Zm.16537.3.S1_a_atCA404068hypothetical protein LOC100273170-2e-22At3g04770RPSAb (40S ribosomal protein SA B)O.I.H.G.S.X.
0.2521.30.98Zm.6074.1.A1_atCF033495SINA4-1e-8At4g27880seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.1912.80.98Zm.5018.3.A1_atAI668145--9e-1At5g48920TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.099.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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