| Gene ID | Zm.7370.1.A1_at |
| Gene name | beta-expansin 1a |
| Homology with Arabidopsis | Similar to At1g20220: nucleic acid binding (HF=5e-1) |
| Module size | 6 genes |
| NF | 0.17 |
| %ile | 12.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 65.7 | 0.92 | Zm.7370.1.A1_at | BM382341 | beta-expansin 1a | - | 5e-1 | At1g20220 | nucleic acid binding | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.91 | Zm.11830.1.S1_at | CA398394 | protein grpE | - | 2e-3 | At5g17710 | EMB1241 (embryo defective 1241) | O.I. | H.G. | S.X. | |
| 0.44 | 55.7 | 0.92 | Zm.13584.1.A1_at | AY107853.1 | - | - | 1e-72 | At1g21640 | NADK2 | O.I. | H.G. | S.X. | |
| 0.12 | 5.9 | 0.91 | Zm.14291.1.S1_at | BE056944 | 40S ribosomal protein S30 | - | 8e-18 | At4g29390 | 40S ribosomal protein S30 (RPS30B) | O.I. | H.G. | S.X. | |
| 0.09 | 4.0 | 0.92 | Zm.19297.1.A1_at | CO524882 | hypothetical protein LOC100193577 | - | 2e-2 | At3g49800 | BSD domain-containing protein | O.I. | H.G. | S.X. | |
| 0.06 | 2.3 | 0.91 | Zm.17352.1.A1_at | CF636500 | - | - | 4e+0 | At5g53030 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 4.1 | 95.9 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM253282 | ZM_8d_SG200_3Alu_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.9 | 95.7 | GSM253280 | ZM_8d_SG200_3Alu_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.8 | 95.5 | GSM253281 | ZM_8d_SG200_3Alu_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.5 | 95.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.5 | 95.1 | GSM320445 | protocol: mRNA - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.3 | 94.7 | GSM205422 | Mo17xB73 19 DAP endosperm tissue biological replicate 1 | GSE8278 | Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP | |
| 3.3 | 94.7 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.9 | 93.8 | GSM320446 | protocol: mRNA - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.8 | 93.5 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.80 | 93.6 | 1621500_at | At1g20220 | hypothetical protein LOC100250385 | - | 3e-2 | At5g28750 | thylakoid assembly protein, putative | O.I. | H.G. | S.X. | |
| 0.28 | 37.7 | 1620694_at | At1g20220 | hypothetical protein LOC100246616 | - | 3e-138 | At4g16155 | dihydrolipoyl dehydrogenase | O.I. | H.G. | S.X. | |
| 0.27 | 34.0 | 1609348_at | At1g20220 | similar to OSJNBa0068L06.9 | - | 4e+0 | At4g24950 | unknown protein | O.I. | H.G. | S.X. | |
| 0.26 | 32.0 | 1619220_at | At1g20220 | hypothetical protein LOC100257112 | - | 3e-89 | At1g23820 | SPDS1 (spermidine synthase 1) | O.I. | H.G. | S.X. | |
| 0.26 | 32.0 | 1621233_at | At1g20220 | hypothetical protein LOC100265883 | - | 2e-12 | At2g16930 | ribosomal protein L27 family protein | O.I. | H.G. | S.X. | |
| 0.23 | 27.5 | 1619944_at | At1g20220 | hypothetical protein LOC100253901 | - | 6e-11 | At3g18740 | 60S ribosomal protein L30 (RPL30C) | O.I. | H.G. | S.X. | |
| 0.17 | 18.2 | 1606964_at | At1g20220 | hypothetical protein LOC100241624 | - | 2e-21 | At5g64130 | - | O.I. | H.G. | S.X. | |
| 0.16 | 16.7 | 1618390_at | At1g20220 | hypothetical protein LOC100243279 | - | 1e+0 | At3g27890 | NQR (NADPH:QUINONE OXIDOREDUCTASE) | O.I. | H.G. | S.X. | |
| 0.14 | 14.4 | 1607450_at | At1g20220 | hypothetical protein LOC100264463 | - | 1e+0 | At5g11070 | unknown protein | O.I. | H.G. | S.X. | |
| 0.14 | 14.4 | 1622059_at | At1g20220 | malate dehydrogenase | - | 3e-40 | At3g15020 | malate dehydrogenase (NAD), mitochondrial, putative | O.I. | H.G. | S.X. | |
| 0.12 | 12.1 | 1619080_at | At1g20220 | hypothetical protein LOC100255686 | - | 6e+0 | Atmg01330 | - | O.I. | H.G. | S.X. | |
| 0.09 | 9.4 | 1614839_s_at | At1g20220 | hypothetical protein LOC100251023 | - | 3e-10 | At1g04290 | thioesterase family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
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