| Gene ID | Zm.7370.1.A1_at |
| Gene name | beta-expansin 1a |
| Homology with Arabidopsis | Similar to At1g20220: nucleic acid binding (HF=5e-1) |
| Module size | 6 genes |
| NF | 0.17 |
| %ile | 12.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 65.7 | 0.92 | Zm.7370.1.A1_at | BM382341 | beta-expansin 1a | - | 5e-1 | At1g20220 | nucleic acid binding | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.91 | Zm.11830.1.S1_at | CA398394 | protein grpE | - | 2e-3 | At5g17710 | EMB1241 (embryo defective 1241) | O.I. | H.G. | S.X. | |
| 0.44 | 55.7 | 0.92 | Zm.13584.1.A1_at | AY107853.1 | - | - | 1e-72 | At1g21640 | NADK2 | O.I. | H.G. | S.X. | |
| 0.12 | 5.9 | 0.91 | Zm.14291.1.S1_at | BE056944 | 40S ribosomal protein S30 | - | 8e-18 | At4g29390 | 40S ribosomal protein S30 (RPS30B) | O.I. | H.G. | S.X. | |
| 0.09 | 4.0 | 0.92 | Zm.19297.1.A1_at | CO524882 | hypothetical protein LOC100193577 | - | 2e-2 | At3g49800 | BSD domain-containing protein | O.I. | H.G. | S.X. | |
| 0.06 | 2.3 | 0.91 | Zm.17352.1.A1_at | CF636500 | - | - | 4e+0 | At5g53030 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 4.1 | 95.9 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM253282 | ZM_8d_SG200_3Alu_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.9 | 95.7 | GSM253280 | ZM_8d_SG200_3Alu_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.8 | 95.5 | GSM253281 | ZM_8d_SG200_3Alu_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.5 | 95.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.5 | 95.1 | GSM320445 | protocol: mRNA - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.3 | 94.7 | GSM205422 | Mo17xB73 19 DAP endosperm tissue biological replicate 1 | GSE8278 | Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP | |
| 3.3 | 94.7 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.9 | 93.8 | GSM320446 | protocol: mRNA - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.8 | 93.5 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.77 | 93.1 | Os10g0555600 | At1g20220 | - | Beta-expansin precursor | 4e-2 | At3g06080 | unknown protein | O.I. | H.G. | S.X. | |
| 0.61 | 81.2 | Os01g0594300 | At1g20220 | - | Extensin-like protein | 4e+0 | At4g13340 | leucine-rich repeat family protein / extensin family protein | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | Os03g0212800 | At1g20220 | - | Beta-glucosidase | 5e-12 | At1g26560 | BGLU40 (BETA GLUCOSIDASE 40) | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | Os03g0633800 | At1g20220 | - | IAA6 (Fragment) | 2e+0 | At5g25890 | IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28) | O.I. | H.G. | S.X. | |
| 0.13 | 8.2 | Os03g0116400 | At1g20220 | - | Membrane protein | 1e-8 | At1g63120 | ATRBL2 (Arabidopsis thaliana Rhomboid-like 2) | O.I. | H.G. | S.X. | |
| 0.07 | 3.7 | Os05g0499300 | At1g20220 | - | Peroxidase precursor (EC 1.11.1.7) | 7e-1 | At3g21770 | peroxidase 30 (PER30) (P30) (PRXR9) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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