CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Zm.7334.1.S1_at

Gene name kinesin-like protein16
Homology with Arabidopsis Similar to At5g41310: kinesin motor protein-related (HF=2e-25)

Module size 6 genes

NF 0.66

%ile 87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.67 85.8 0.98 Zm.7334.1.S1_at CD975420 kinesin-like protein16 - 2e-25 At5g41310 kinesin motor protein-related O.I. H.G. S.X.
0.77 92.1 0.98 Zm.3450.1.A1_at AW066723 hypothetical protein LOC100191605 - 4e+0 At2g38695 unknown protein O.I. H.G. S.X.
0.73 89.9 0.98 Zm.19204.1.S1_at CA404362 protein phosphatase 2C-like - 1e-3 At1g09160 protein phosphatase 2C-related / PP2C-related O.I. H.G. S.X.
0.73 89.9 0.98 Zm.7332.1.S1_at CF013037 kinesin-like protein9 - 2e-24 At3g16630 KINESIN-13A O.I. H.G. S.X.
0.73 89.9 0.98 Zm.19203.1.S1_at CO520849 hypothetical protein LOC100193957 - 1e-5 At3g07220 transcriptional activator, putative O.I. H.G. S.X.
0.29 28.1 0.98 Zm.6731.1.A1_at AI395998 hypothetical protein LOC100279494 - 1e-14 At1g50670 OTU-like cysteine protease family protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.1 98.4 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6 98.3 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0 98.0 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4 97.8 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5 97.5 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4 97.5 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9 97.3 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9 97.3 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6 97.1 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0 94.0 GSM202298 B73 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

A co-expression module including the grape gene, 1615797_at, orthologous to the query gene, Zm.7334.1.S1_at

VF %ile Gene ID Repr. ID Gene Name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.75 91.3 1615797_at At5g41310 hypothetical protein LOC100256435 - 9e-27 At5g41310 kinesin motor protein-related O.I. H.G. S.X.
0.68 88.0 1616512_at At5g41310 hypothetical LOC100244665 - 2e-8 At5g12350 Ran GTPase binding / chromatin binding / zinc ion binding O.I. H.G. S.X.
0.61 83.2 1618990_at At5g41310 hypothetical protein LOC100243216 - 2e-1 At5g62880 ARAC10 O.I. H.G. S.X.
0.58 79.8 1609143_at At5g41310 hypothetical protein LOC100254311 - 2e+1 At5g66240 transducin family protein / WD-40 repeat family protein O.I. H.G. S.X.
0.56 79.4 1609398_at At5g41310 hypothetical protein LOC100261736 - 3e-66 At5g23860 TUB8 O.I. H.G. S.X.
0.53 75.2 1612852_at At5g41310 hypothetical protein LOC100243284 - 5e-76 At5g62890 permease, putative O.I. H.G. S.X.
0.53 75.2 1609772_at At5g41310 hypothetical protein LOC100246247 - 3e-1 At3g56880 VQ motif-containing protein O.I. H.G. S.X.
0.50 72.7 1613050_at At5g41310 hypothetical protein LOC100248215 - 5e-4 At1g20470 auxin-responsive family protein O.I. H.G. S.X.
0.50 72.7 1610048_at At5g41310 hypothetical protein LOC100258703 - 3e-4 At5g37310 - O.I. H.G. S.X.
0.47 67.7 1620576_at At5g41310 hypothetical protein LOC100246757 - 7e-5 At1g27370 squamosa promoter-binding protein-like 10 (SPL10) O.I. H.G. S.X.
0.44 64.1 1606978_s_at At5g41310 hypothetical protein LOC100242245 - 5e-1 At1g16680 DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative O.I. H.G. S.X.
0.44 64.1 1614963_at At5g41310 hypothetical protein LOC100266167 - 8e-12 At1g01950 armadillo/beta-catenin repeat family protein / kinesin motor family protein O.I. H.G. S.X.
0.41 58.7 1614917_at At5g41310 hypothetical protein LOC100267340 - 4e+0 At5g60660 PIP2 O.I. H.G. S.X.
0.41 58.7 1607831_at At5g41310 hypothetical protein LOC100249242 - 8e-7 At3g03950 protein binding O.I. H.G. S.X.
0.34 46.8 1617357_at At5g41310 hypothetical protein LOC100263238 - 3e-25 At5g57410 unknown protein O.I. H.G. S.X.
0.32 43.1 1622084_at At5g41310 hypothetical protein LOC100256435 - 1e+0 At5g51451 unknown protein O.I. H.G. S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum

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