Co-expression analysis

Gene ID	Zm.7334.1.S1_at
Gene name	kinesin-like protein16
Homology with Arabidopsis	Similar to At5g41310: kinesin motor protein-related (HF=2e-25)
Module size	6 genes
NF	0.66
%ile	87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.98	Zm.7334.1.S1_at	CD975420	kinesin-like protein16	-	2e-25	At5g41310	kinesin motor protein-related	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.98	Zm.3450.1.A1_at	AW066723	hypothetical protein LOC100191605	-	4e+0	At2g38695	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.19204.1.S1_at	CA404362	protein phosphatase 2C-like	-	1e-3	At1g09160	protein phosphatase 2C-related / PP2C-related	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.7332.1.S1_at	CF013037	kinesin-like protein9	-	2e-24	At3g16630	KINESIN-13A	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.19203.1.S1_at	CO520849	hypothetical protein LOC100193957	-	1e-5	At3g07220	transcriptional activator, putative	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.98	Zm.6731.1.A1_at	AI395998	hypothetical protein LOC100279494	-	1e-14	At1g50670	OTU-like cysteine protease family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.1	98.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0	94.0	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.212660.1.S1_at, orthologous to the query gene, Zm.7334.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.43	69.7	PtpAffx.212660.1.S1_at	At5g41310	hypothetical protein	-	2e-48	At1g18410	kinesin motor protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	PtpAffx.207857.1.S1_at	At5g41310	hypothetical protein	-	2e-5	At1g09157	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	PtpAffx.225405.1.S1_at	At5g41310	hypothetical protein	-	1e-49	At1g19780	ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	PtpAffx.204225.1.S1_at	At5g41310	hypothetical protein	-	1e-3	At2g21620	RD2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	PtpAffx.113969.1.A1_at	At5g41310	-	-	2e-9	At5g54300	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	PtpAffx.212147.1.S1_at	At5g41310	hypothetical protein	-	9e-3	At3g04360	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	PtpAffx.211189.1.S1_at	At5g41310	hypothetical protein	-	1e+0	At3g20580	COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.48	75.4	PtpAffx.201958.1.S1_at	At5g41310	hypothetical protein	-	2e-19	At1g58120	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

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