Co-expression analysis

Gene ID Zm.7240.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g61450: 2-phosphoglycerate kinase-related (HF=1e-18)
Module size 6 genes
NF 0.67
%ile 89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.99Zm.7240.1.S1_atBI430972--1e-18At5g614502-phosphoglycerate kinase-relatedO.I.H.G.S.X.
0.6785.80.99Zm.15932.1.A1_atAJ577238.1beta3-glucuronyltransferase-8e-1At5g28610-O.I.H.G.S.X.
0.6077.80.99Zm.16593.4.S1_atCA401361hypothetical protein LOC100194160-2e-4At5g51840unknown proteinO.I.H.G.S.X.
0.6077.80.99Zm.15933.1.A1_atCA400453--2e-22At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)O.I.H.G.S.X.
0.5369.10.99Zm.5082.1.S1_atAY107877.1nucleoside diphosphate kinase 4-6e-29At4g11010NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3)O.I.H.G.S.X.
0.4658.40.99Zm.7145.1.A1_atBE510364hypothetical protein LOC100193598-2e-5At5g07180ERL2 (ERECTA-LIKE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.494.9GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.294.5GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.194.3GSM202315B73 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.194.3GSM202322B73x Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.194.3GSM202324Mo17xB73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.094.0GSM202320B73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.993.8GSM202318B73xMo17 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.993.8GSM202309Mo17 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.793.2GSM202314Mo17 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.793.2GSM202313B73xMo17 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage