Co-expression analysis

Gene ID Zm.721.1.A1_at
Gene name Salt-inducible putative protein serine/threonine/tyrosine kinase
Homology with ArabidopsisSimilar to At1g06700: serine/threonine protein kinase, putative (HF=1e-33)
Module size 9 genes
NF 0.59
%ile 78.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8495.80.98Zm.721.1.A1_atBM267834Salt-inducible putative protein serine/threonine/tyrosine kinase-1e-33At1g06700serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.8094.00.99Zm.14501.4.S1_x_atCK849957hypothetical protein LOC100191411-3e-46At5g22060ATJ2O.I.H.G.S.X.
0.6785.80.99Zm.13239.1.A1_atBG320233hypothetical LOC542287-4e-12At3g27690LHCB2.3O.I.H.G.S.X.
0.6381.10.99Zm.3457.1.A1_atAW171820hypothetical protein LOC100193080-2e-19At3g21640TWD1 (TWISTED DWARF 1)O.I.H.G.S.X.
0.5065.70.99Zm.7127.1.A1_atBM266653nonspecific lipid-transfer protein-8e+0At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.3844.20.99Zm.1269.1.A1_atBM350862--5e+0At5g53980ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)O.I.H.G.S.X.
0.3641.30.99Zm.16709.1.A1_atCN844137--2e+0At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)O.I.H.G.S.X.
0.3538.90.99Zm.6675.1.A1_atBM337828--4e-31At4g12650-O.I.H.G.S.X.
0.3538.90.99Zm.12225.1.A1_atCA403034DIP1-2e+0At3g14340unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.598.7GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
6.397.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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