Co-expression analysis

Gene ID	Zm.7167.1.A1_at
Gene name	membrane protein
Homology with Arabidopsis	Similar to At1g27350: - (HF=4e-7)
Module size	8 genes
NF	0.38
%ile	41.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	81.1	0.96	Zm.7167.1.A1_at	BU050804	membrane protein	-	4e-7	At1g27350	-	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.96	Zm.10263.1.S1_at	AF351190.1	D-type cyclin	-	9e-1	At2g36260	iron-sulfur cluster assembly complex protein, putative	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.96	Zm.10264.1.S1_at	BU049716	-	-	9e-1	At3g22530	unknown protein	O.I.	H.G.	S.X.	Please select
0.58	75.1	0.96	Zm.17443.1.A1_at	CK347379	-	-	5e+0	At4g14100	transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.97	Zm.17174.1.A1_at	CO531239	hypothetical protein LOC100273979	-	2e-6	At1g24400	LHT2 (LYSINE HISTIDINE TRANSPORTER 2)	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.97	Zm.9717.1.A1_at	BM336547	hypothetical protein LOC100192773	-	9e-5	At2g47490	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.97	Zm.5012.1.A1_at	CK849978	auxin response factor 75	-	9e-1	At3g45050	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.96	Zm.17923.1.A1_at	AY110526.1	hypothetical protein LOC100276264	-	1e-1	At2g44840	ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	94.9	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.2	94.5	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.2	94.5	GSM206332	Lower pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.1	94.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM206329	Right pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.0	94.0	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.0	94.0	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.0	94.0	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
2.9	93.8	GSM206326	Upper pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.9	93.8	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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