Co-expression analysis

Gene ID Zm.7122.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g35580: CINV1 (cytosolic invertase 1) (HF=2e+0)
Module size 6 genes
NF 0.43
%ile 51.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.7122.1.A1_atAY111472.1--2e+0At1g35580CINV1 (cytosolic invertase 1)O.I.H.G.S.X.
0.6785.80.99Zm.405.1.A1_atAF037034.2hypothetical LOC541674-2e-1At5g05340peroxidase, putativeO.I.H.G.S.X.
0.6077.80.99Zm.2942.1.A1_atAY105337.1replication factor C subunit 2-8e-38At1g21690emb1968 (embryo defective 1968)O.I.H.G.S.X.
0.4861.30.99Zm.2952.1.A1_a_atCF629660hypothetical protein LOC100192920-2e-3At3g26680SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)O.I.H.G.S.X.
0.2521.30.99Zm.7121.2.S1_atAF457960.1--5e-6At3g12120FAD2 (FATTY ACID DESATURASE 2)O.I.H.G.S.X.
0.2014.20.99Zm.17316.1.A1_atCK369406--4e+0At5g38317LCR58 (Low-molecular-weight cysteine-rich 58)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.098.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.85241.1.S1_at, orthologous to the query gene, Zm.7122.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9498.9TaAffx.85241.1.S1_atAt1g35580--6e+0At1g74300esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.6182.0TaAffx.52614.1.S1_atAt1g35580--1e+1At3g58450universal stress protein (USP) family proteinO.I.H.G.S.X.
0.6182.0Ta.8765.1.A1_x_atAt1g35580--3e+0At3g03405-O.I.H.G.S.X.
0.6182.0Ta.8195.2.S1_atAt1g35580--2e-6At1g68010HPRO.I.H.G.S.X.
0.6182.0Ta.13051.1.S1_atAt1g35580--9e-2At4g24026unknown proteinO.I.H.G.S.X.
0.5475.5TaAffx.105889.1.S1_s_atAt1g35580--1e+0At3g61260DNA-binding family protein / remorin family proteinO.I.H.G.S.X.
0.5273.7TaAffx.36684.1.A1_atAt1g35580--2e-1At5g14690unknown proteinO.I.H.G.S.X.
0.5173.0Ta.15206.1.S1_atAt1g35580--3e-1At2g22320unknown proteinO.I.H.G.S.X.
0.4969.7TaAffx.54617.1.S1_atAt1g35580--2e+1At5g45573unknown proteinO.I.H.G.S.X.
0.4767.9Ta.17635.1.S1_atAt1g35580--7e-1At3g32160unknown proteinO.I.H.G.S.X.
0.4464.5TaAffx.5547.1.S1_atAt1g35580--4e+0At5g50740metal ion bindingO.I.H.G.S.X.
0.4362.2Ta.23299.2.S1_atAt1g35580--9e-1At5g06380unknown proteinO.I.H.G.S.X.
0.4058.4TaAffx.81077.1.S1_s_atAt1g35580--5e-3At3g20900unknown proteinO.I.H.G.S.X.
0.3956.1Ta.26661.1.A1_atAt1g35580--4e-10At5g19760dicarboxylate/tricarboxylate carrier (DTC)O.I.H.G.S.X.
0.3142.7TaAffx.107754.1.S1_atAt1g35580--1e+0At2g21780unknown proteinO.I.H.G.S.X.
0.2227.1Ta.641.2.S1_atAt1g35580--3e-1At2g20616unknown proteinO.I.H.G.S.X.
0.2024.0TaAffx.26416.1.S1_atAt1g35580--4e+1At5g01350unknown proteinO.I.H.G.S.X.
0.056.7TaAffx.8755.1.S1_s_atAt1g35580--3e-1At3g06780glycine-rich proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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