Co-expression analysis

Gene ID Zm.7097.2.A1_a_at
Gene name hypothetical protein LOC100273341 /// 40S ribosomal protein S18
Homology with ArabidopsisSimilar to At1g22780: PFL (POINTED FIRST LEAVES) (HF=2e-27)
Module size 6 genes
NF 0.68
%ile 90.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.97Zm.7097.2.A1_a_atCF019338hypothetical protein LOC100273341 /// 40S ribosomal protein S18-2e-27At1g22780PFL (POINTED FIRST LEAVES)O.I.H.G.S.X.
0.9199.00.97Zm.7096.1.A1_atBM338621eukaryotic translation initiation factor 6-1e-29At3g55620emb1624 (embryo defective 1624)O.I.H.G.S.X.
0.8395.60.97Zm.7097.1.S1_atBQ279744hypothetical protein LOC100273341-4e-29At1g22780PFL (POINTED FIRST LEAVES)O.I.H.G.S.X.
0.6785.80.98Zm.5721.1.S1_atAI637090hypothetical protein LOC100191423-9e-2At4g12460ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)O.I.H.G.S.X.
0.4658.40.97Zm.17766.1.S1_atCK371550--3e+0At5g14730unknown proteinO.I.H.G.S.X.
0.3538.90.97Zm.9760.1.A1_atBM335574hypothetical protein LOC100278683-1e+0At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.895.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM205368B73xMo17 13 DAP endosperm tissue biological replicate 1GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1606692_at, orthologous to the query gene, Zm.7097.2.A1_a_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6081.91606692_atAt1g22780hypothetical protein LOC100254425-2e-86At1g3403040S ribosomal protein S18 (RPS18B)O.I.H.G.S.X.
0.6183.21608369_s_atAt1g22780hypothetical protein LOC100261444-2e+0At1g66360C2 domain-containing proteinO.I.H.G.S.X.
0.6081.91621711_atAt1g22780hypothetical protein LOC100264431-6e-24At4g22670AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)O.I.H.G.S.X.
0.5577.31607854_atAt1g22780hypothetical protein LOC100255902-1e-75At3g6287060S ribosomal protein L7A (RPL7aB)O.I.H.G.S.X.
0.2530.51611023_atAt1g22780hypothetical protein LOC100253512-5e-84At5g58030transport protein particle (TRAPP) component Bet3 family proteinO.I.H.G.S.X.
0.1920.91610625_atAt1g22780hypothetical protein LOC100259247-6e-30At4g08960phosphotyrosyl phosphatase activator (PTPA) family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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