Co-expression analysis

Gene ID	Zm.7096.1.A1_at
Gene name	eukaryotic translation initiation factor 6
Homology with Arabidopsis	Similar to At3g55620: emb1624 (embryo defective 1624) (HF=1e-29)
Module size	6 genes
NF	0.68
%ile	90.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.97	Zm.7096.1.A1_at	BM338621	eukaryotic translation initiation factor 6	-	1e-29	At3g55620	emb1624 (embryo defective 1624)	O.I.	H.G.	S.X.	Please select
0.91	99.0	0.97	Zm.7097.2.A1_a_at	CF019338	hypothetical protein LOC100273341 /// 40S ribosomal protein S18	-	2e-27	At1g22780	PFL (POINTED FIRST LEAVES)	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.97	Zm.7097.1.S1_at	BQ279744	hypothetical protein LOC100273341	-	4e-29	At1g22780	PFL (POINTED FIRST LEAVES)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.5721.1.S1_at	AI637090	hypothetical protein LOC100191423	-	9e-2	At4g12460	ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.17766.1.S1_at	CK371550	-	-	3e+0	At5g14730	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.9760.1.A1_at	BM335574	hypothetical protein LOC100278683	-	1e+0	At5g67060	HEC1 (HECATE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.1	97.4	GSM253275	ZM_8d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
4.9	96.7	GSM253274	ZM_8d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.3	96.1	GSM253276	ZM_8d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.6	95.2	GSM253267	ZM_4d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.2	94.5	GSM320443	protocol: mRNA - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
2.4	92.2	GSM253265	ZM_4d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
2.4	92.2	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
2.3	91.7	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
2.2	91.3	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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