Co-expression analysis

Gene ID	Zm.7094.2.S1_at
Gene name	60S ribosomal protein L7a
Homology with Arabidopsis	Similar to At3g62870: 60S ribosomal protein L7A (RPL7aB) (HF=3e-80)
Module size	7 genes
NF	0.51
%ile	66.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	81.1	0.88	Zm.7094.2.S1_at	CA403709	60S ribosomal protein L7a	-	3e-80	At3g62870	60S ribosomal protein L7A (RPL7aB)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.89	Zm.10332.1.A1_a_at	BQ048110	-	-	2e+0	At3g28990	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.83	Zm.1820.1.S1_at	CF009592	-	-	2e-3	At5g46780	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.81	Zm.11960.1.A1_at	BM382185	-	-	9e-1	At1g68260	thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.88	Zm.5935.1.A1_at	CF633631	hypothetical protein LOC100194239	-	2e+0	At3g12260	complex 1 family protein / LVR family protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.92	Zm.6390.1.S1_at	BU098381	hypothetical protein LOC100277409	-	8e+0	At5g26070	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.89	Zm.3487.1.A1_at	CK986046	arabinogalactan protein	-	4e-14	At5g11680	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.0	97.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2	94.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.7	93.2	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.7	93.2	GSM205371	Mo17xB73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.6	92.9	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.5	92.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.3	91.7	GSM205370	B73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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