Co-expression analysis

Gene ID	Zm.7089.1.A1_at
Gene name	hypothetical protein LOC100217060
Homology with Arabidopsis	Similar to At1g15270: - (HF=1e-1)
Module size	7 genes
NF	0.22
%ile	16.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	0.89	Zm.7089.1.A1_at	BM079067	hypothetical protein LOC100217060	-	1e-1	At1g15270	-	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.91	Zm.17826.1.A1_at	CK367946	hypothetical protein LOC100280315	-	1e-1	At2g31870	TEJ (Sanskrit for 'bright')	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.91	Zm.15050.1.A1_at	CD445868	-	-	9e+0	At5g37760	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.94	Zm.13058.1.S1_at	CA403926	-	-	3e+0	At1g60470	AtGolS4 (Arabidopsis thaliana galactinol synthase 4)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.91	Zm.8762.1.A1_at	CF625727	-	-	2e+0	At1g56670	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.91	Zm.10778.1.A1_a_at	CF627974	FIP1	-	4e-1	At4g40100	ABA-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.90	Zm.8761.1.A1_s_at	BM269347	-	-	4e+0	At3g27850	RPL12-C (ribosomal protein l12-c)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.0	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.0	90.2	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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