Co-expression analysis

Gene ID	Zm.7051.1.S1_at
Gene name	hypothetical protein LOC100277200
Homology with Arabidopsis	Similar to At5g61997: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.47
%ile	57.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.99	Zm.7051.1.S1_at	AI833408	hypothetical protein LOC100277200	-	1e+0	At5g61997	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.99	Zm.7049.1.A1_at	AW331717	huntingtin interacting protein K	-	4e-13	At3g06610	DNA-binding enhancer protein-related	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.99	Zm.7048.1.A1_at	AI677399	hypothetical protein LOC100194145	-	6e-7	At4g30996	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.99	Zm.5824.1.A1_at	AI649789	-	-	2e+0	At5g10680	calmodulin-binding protein-related	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.99	Zm.6614.1.A1_at	CO533019	coronatine-insensitive protein 1	-	1e+0	At2g26030	F-box family protein	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.99	Zm.5833.1.A1_at	CA398697	adenylate kinase	-	1e-2	At5g47840	AMK2 (Adenosine monophosphate kinase)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	95.8	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.4	94.9	GSM320441	protocol: mRNA - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM375788	Deep-sowing 10d treatment Control, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
2.7	93.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.5	92.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.3	91.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.0	90.2	GSM205374	B73 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.0	90.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.0	90.2	GSM205371	Mo17xB73 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
1.9	89.6	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.215373.1.S1_s_at, orthologous to the query gene, Zm.7051.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	97.4	PtpAffx.215373.1.S1_s_at	At5g61997	hypothetical protein	-	4e-1	At4g00250	DNA-binding storekeeper protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.95	99.7	PtpAffx.7783.1.S1_a_at	At5g61997	cytochrome P450 /// cytochrome P450	-	3e-4	At4g37330	CYP81D4	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.92	99.3	Ptp.4381.1.S1_s_at	At5g61997	-	-	4e-6	At3g48320	CYP71A21	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.90	97.9	PtpAffx.6449.1.A1_at	At5g61997	hypothetical protein	-	5e+0	At4g21090	adrenodoxin-like ferredoxin 1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.90	97.9	PtpAffx.206614.1.S1_at	At5g61997	hypothetical protein	-	1e-15	At1g67650	7S RNA binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.90	97.9	PtpAffx.225115.1.S1_at	At5g61997	hypothetical protein	-	7e+0	At5g06230	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.90	97.9	Ptp.5107.2.S1_at	At5g61997	hypothetical protein	-	5e-56	At2g34860	EDA3 (embryo sac development arrest 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.90	97.9	PtpAffx.225115.1.S1_x_at	At5g61997	hypothetical protein	-	7e+0	At5g06230	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.90	97.9	PtpAffx.75857.1.A1_at	At5g61997	porin/voltage-dependent anion-selective channel protein	-	2e+0	At2g26370	MD-2-related lipid recognition domain-containing protein / ML domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.87	97.5	PtpAffx.134458.1.A1_at	At5g61997	-	-	1e+0	At1g69980	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.82	96.3	PtpAffx.123510.1.S1_at	At5g61997	hypothetical protein	-	7e-16	At5g42890	SCP2 (STEROL CARRIER PROTEIN 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.82	96.3	PtpAffx.101679.1.A1_at	At5g61997	hypothetical protein	-	6e-1	At2g30440	chloroplast thylakoidal processing peptidase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.78	95.1	PtpAffx.204120.1.S1_at	At5g61997	hypothetical protein	-	5e-3	At1g80610	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.76	94.3	PtpAffx.201493.1.S1_at	At5g61997	hypothetical protein	-	2e-19	At1g55670	PSAG (PHOTOSYSTEM I SUBUNIT G)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.75	94.1	PtpAffx.67394.1.S1_at	At5g61997	hypothetical protein	-	1e+0	At3g48710	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	PtpAffx.10717.2.S1_at	At5g61997	hypothetical protein	-	8e-1	At5g46150	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.70	91.7	PtpAffx.12873.1.A1_at	At5g61997	light harvesting-like protein 3	-	2e-52	At5g47110	lil3 protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	PtpAffx.2562.1.A1_at	At5g61997	hypothetical protein	-	1e-3	At2g37700	catalytic/ iron ion binding / oxidoreductase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.56	83.9	PtpAffx.13784.1.S1_at	At5g61997	hypothetical protein	-	2e-2	At1g02205	CER1 (ECERIFERUM 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.51	78.9	PtpAffx.105386.1.S1_at	At5g61997	2-oxoglutarate-dependent dioxygenase	-	2e-9	At3g50210	2-oxoacid-dependent oxidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

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