Co-expression analysis

Gene ID Zm.6934.1.A1_at
Gene name hypothetical protein LOC100273323
Homology with ArabidopsisSimilar to At3g01790: ribosomal protein L13 family protein (HF=9e-6)
Module size 6 genes
NF 0.75
%ile 95.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.6934.1.A1_atAY105351.1hypothetical protein LOC100273323-9e-6At3g01790ribosomal protein L13 family proteinO.I.H.G.S.X.
0.8094.00.99Zm.18264.1.A1_atCK347588--1e+0At4g16610zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.8094.00.99Zm.5052.1.A1_atCK145364hypothetical protein LOC100279399-6e+0At5g24313unknown proteinO.I.H.G.S.X.
0.6785.80.99Zm.15789.3.A1_x_atCF628232hypothetical protein LOC100276378-3e+0At4g19829unknown proteinO.I.H.G.S.X.
0.5775.10.99Zm.18145.1.S1_atBU079975--1e+1At5g46890protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.5065.70.99Zm.5147.1.A1_atCK787170--2e-25At5g36290unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.598.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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