Co-expression analysis

Gene ID	Zm.6933.1.A1_at
Gene name	hypothetical protein LOC100274350
Homology with Arabidopsis	Similar to At1g33280: ANAC015 (Arabidopsis NAC domain containing protein 15) (HF=3e+0)
Module size	6 genes
NF	0.33
%ile	33.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	95.6	0.98	Zm.6933.1.A1_at	BI679493	hypothetical protein LOC100274350	-	3e+0	At1g33280	ANAC015 (Arabidopsis NAC domain containing protein 15)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.3077.2.S1_x_at	CF061929	calmodulin	-	4e-97	At3g43810	CAM7 (CALMODULIN 7)	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.98	Zm.17472.1.S1_at	CK368086	-	-	6e+0	At5g05050	peptidase C1A papain family protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.98	Zm.765.1.A1_at	BG354184	hypothetical protein LOC100274097	-	3e+0	At1g70400	-	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.98	Zm.17860.1.S1_at	CF633746	hypothetical protein LOC100193614	-	3e-28	At5g07440	GDH2 (GLUTAMATE DEHYDROGENASE 2)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.98	Zm.3486.2.S1_at	AY111804.1	-	-	3e-1	At5g52545	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.4	98.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.4	92.2	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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