Co-expression analysis

Gene ID	Zm.6915.1.S1_at
Gene name	hypothetical protein LOC100280116
Homology with Arabidopsis	Similar to At5g64160: unknown protein (HF=5e-1)
Module size	6 genes
NF	0.67
%ile	89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.99	Zm.6915.1.S1_at	AW256266	hypothetical protein LOC100280116	-	5e-1	At5g64160	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.6103.3.S1_at	AI668289	-	-	8e-1	At1g21010	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.98	Zm.12244.1.A1_at	AY105130.1	-	-	4e-8	At2g37500	arginine biosynthesis protein ArgJ family	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.98	Zm.3743.2.S1_at	AY109746.1	-	-	2e+0	At5g04045	Expressed protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.99	Zm.3743.2.A1_a_at	CF624095	hypothetical protein LOC100274177	-	2e+0	At5g04045	Expressed protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.98	Zm.6916.1.S1_at	AW067358	hypothetical protein LOC100273981	-	9e-13	At5g66750	CHR1 (CHROMATIN REMODELING 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.2	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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