Co-expression analysis

Gene ID	Zm.6913.2.A1_a_at
Gene name
Homology with Arabidopsis	Similar to At2g16060: AHB1 (ARABIDOPSIS HEMOGLOBIN 1) (HF=9e-1)
Module size	9 genes
NF	0.32
%ile	31.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.0	0.92	Zm.6913.2.A1_a_at	AI065646	-	-	9e-1	At2g16060	AHB1 (ARABIDOPSIS HEMOGLOBIN 1)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.95	Zm.9015.1.A1_a_at	CF634204	-	-	4e-93	At5g50920	CLPC1	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.95	Zm.6402.3.S1_a_at	AI770444	DELLA protein DWARF8 /// dwarf plant9	-	8e-1	At5g42635	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.95	Zm.13962.1.S1_at	CO528594	334B7.2 protein	-	9e-3	At2g15860	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.95	ZmAffx.284.1.A1_at	AI670415	-	-	1e+1	At3g53990	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.95	Zm.18420.1.S1_at	CA403504	hypothetical protein LOC100272732	-	8e-7	At5g01410	RSR4 (REDUCED SUGAR RESPONSE 4)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.95	Zm.9082.2.S1_at	BQ619513	-	-	3e-10	At2g25070	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.94	Zm.4970.1.A1_at	CF627302	NAD-dependent dyhydrogenase, Gfo/Idh/MocA family	-	9e-5	At3g20790	oxidoreductase family protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.93	Zm.9568.3.A1_x_at	AI734774	Hypothetical protein LOC100191846	-	2e-11	At3g03250	UGP (UDP-glucose pyrophosphorylase)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.4	98.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.2	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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