Co-expression analysis

Gene ID Zm.6904.1.S1_at
Gene name hypothetical protein LOC100273500
Homology with ArabidopsisSimilar to At5g37020: ARF8 (AUXIN RESPONSE FACTOR 8) (HF=6e-24)
Module size 6 genes
NF 0.39
%ile 42.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4861.30.97Zm.6904.1.S1_atAY106446.1hypothetical protein LOC100273500-6e-24At5g37020ARF8 (AUXIN RESPONSE FACTOR 8)O.I.H.G.S.X.
0.5775.10.98Zm.7611.2.A1_atBM268818--2e-3At1g49400emb1129 (embryo defective 1129)O.I.H.G.S.X.
0.4455.70.97Zm.19300.1.S1_atCO522732DNA repair protein RAD51-3e+0At2g45280ATRAD51CO.I.H.G.S.X.
0.4048.50.97Zm.13871.1.A1_atAF099434.1R2R3MYB-domain protein-2e-5At1g08810MYB60 (myb domain protein 60)O.I.H.G.S.X.
0.2724.60.97Zm.15852.2.A1_atAY108720.1--1e-41At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinO.I.H.G.S.X.
0.2419.80.97Zm.14272.2.A1_atD10622.1corn cystatin I-6e-7At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.398.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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