Co-expression analysis

Gene ID	Zm.6863.2.A1_at
Gene name	hypothetical protein LOC100193970
Homology with Arabidopsis	Similar to At1g48410: AGO1 (ARGONAUTE 1) (HF=7e-67)
Module size	7 genes
NF	0.50
%ile	63.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.97	Zm.6863.2.A1_at	CF637783	hypothetical protein LOC100193970	-	7e-67	At1g48410	AGO1 (ARGONAUTE 1)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.98	Zm.18816.1.A1_at	CO527305	indole-3-acetate beta-glucosyltransferase	-	1e+0	At4g33730	pathogenesis-related protein, putative	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.3393.1.A1_at	CF634160	-	-	1e+0	At5g15530	BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.97	Zm.4758.1.S1_at	AY111436.1	-	-	1e+0	At4g17890	AGD8 (ARF-GAP DOMAIN 8)	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.98	Zm.15451.1.S1_at	CD439729	hypothetical protein LOC100192101	-	5e+0	At2g15830	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.97	Zm.14496.1.A1_at	CF014750	sesquiterpene cyclase-like	-	1e+0	At5g46710	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.98	Zm.2378.1.A1_at	BQ485596	-	-	8e-10	At1g70750	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.5	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.9	93.8	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
2.6	92.9	GSM206287	Left pulvinus control total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.6	92.9	GSM206298	Lower pulvinus 60 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.5	92.6	GSM206305	Right pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.5	92.6	GSM206306	Lower pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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