Co-expression analysis

Gene ID Zm.6863.2.A1_at
Gene name hypothetical protein LOC100193970
Homology with ArabidopsisSimilar to At1g48410: AGO1 (ARGONAUTE 1) (HF=7e-67)
Module size 7 genes
NF 0.50
%ile 63.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5065.70.97Zm.6863.2.A1_atCF637783hypothetical protein LOC100193970-7e-67At1g48410AGO1 (ARGONAUTE 1)O.I.H.G.S.X.
0.6179.50.98Zm.18816.1.A1_atCO527305indole-3-acetate beta-glucosyltransferase-1e+0At4g33730pathogenesis-related protein, putativeO.I.H.G.S.X.
0.5065.70.98Zm.3393.1.A1_atCF634160--1e+0At5g15530BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)O.I.H.G.S.X.
0.4861.30.97Zm.4758.1.S1_atAY111436.1--1e+0At4g17890AGD8 (ARF-GAP DOMAIN 8)O.I.H.G.S.X.
0.4251.30.98Zm.15451.1.S1_atCD439729hypothetical protein LOC100192101-5e+0At2g15830unknown proteinO.I.H.G.S.X.
0.4251.30.97Zm.14496.1.A1_atCF014750sesquiterpene cyclase-like-1e+0At5g46710zinc-binding family proteinO.I.H.G.S.X.
0.3641.30.98Zm.2378.1.A1_atBQ485596--8e-10At1g70750unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.598.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM206310Lower pulvinus 60 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.993.8GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.692.9GSM206287Left pulvinus control total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.692.9GSM206298Lower pulvinus 60 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.592.6GSM206305Right pulvinus control polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.592.6GSM206306Lower pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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