Co-expression analysis

Gene ID Zm.6832.1.A1_at
Gene name hypothetical protein LOC100192878
Homology with ArabidopsisSimilar to At3g05590: RPL18 (RIBOSOMAL PROTEIN L18) (HF=9e-9)
Module size 6 genes
NF 0.52
%ile 68.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4455.70.98Zm.6832.1.A1_atAY106208.1hypothetical protein LOC100192878-9e-9At3g05590RPL18 (RIBOSOMAL PROTEIN L18)O.I.H.G.S.X.
0.6785.80.98Zm.17489.1.A1_atCK369860sulfated surface glycoprotein 185-3e-1At1g75550glycine-rich proteinO.I.H.G.S.X.
0.6179.50.98Zm.17484.1.A1_atCK394771hypothetical protein LOC100191396-1e+0At3g15250unknown proteinO.I.H.G.S.X.
0.4658.40.98Zm.6594.1.A1_atCF972362hypothetical protein LOC100193029-1e-3At5g23950C2 domain-containing proteinO.I.H.G.S.X.
0.4251.30.98Zm.9028.1.A1_atCF972398hypothetical protein LOC100193938 /// hypothetical protein LOC100278288-6e+0At5g53680RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4048.50.98Zm.6905.3.S1_atCD444092Histone H1-like protein-3e-1At4g04620ATG8B (autophagy 8b)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.498.4GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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