Co-expression analysis

Gene ID	Zm.6822.2.S1_a_at
Gene name	receptor expression-enhancing protein 3
Homology with Arabidopsis	Similar to At5g42560: abscisic acid-responsive HVA22 family protein (HF=3e-2)
Module size	6 genes
NF	0.79
%ile	97.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.6822.2.S1_a_at	CO518852	receptor expression-enhancing protein 3	-	3e-2	At5g42560	abscisic acid-responsive HVA22 family protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.13188.3.S1_x_at	BM076074	hypothetical protein LOC100193240	-	8e-6	At2g37270	ATRPS5B (RIBOSOMAL PROTEIN 5B)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.5962.1.S1_at	AY241545.1	glyoxalase I	-	1e-17	At1g11840	ATGLX1 (GLYOXALASE I HOMOLOG)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.3350.2.A1_at	CA400679	U6 snRNA-associated Sm-like protein LSm4	-	7e-34	At5g27720	emb1644 (embryo defective 1644)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.1596.1.S1_at	AY104099.1	-	-	9e-1	At4g00880	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.98	Zm.12898.1.A1_at	CA401243	hypothetical protein LOC100274425	-	8e+0	At3g25950	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.8	99.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.9	99.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.3	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
8.3	98.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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