Co-expression analysis

Gene ID Zm.6729.1.S1_at
Gene name hypothetical protein LOC100273464 /// lysine ketoglutarate reductase trans-splicing related 1
Homology with ArabidopsisSimilar to At1g67850: unknown protein (HF=6e-34)
Module size 16 genes
NF 0.55
%ile 72.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.95Zm.6729.1.S1_atBM080531hypothetical protein LOC100273464 /// lysine ketoglutarate reductase trans-splicing related 1-6e-34At1g67850unknown proteinO.I.H.G.S.X.
0.7490.30.95Zm.1544.1.A1_a_atBM340714herbicide safener binding protein1-3e+0At4g21190emb1417 (embryo defective 1417)O.I.H.G.S.X.
0.6785.80.95Zm.16214.1.A1_atBM079137--2e-1At3g04890unknown proteinO.I.H.G.S.X.
0.6381.10.96Zm.5081.1.S1_atAW216015hypothetical protein LOC100274512-5e-42At1g10940SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4)O.I.H.G.S.X.
0.5875.10.95Zm.4970.1.A1_atCF627302NAD-dependent dyhydrogenase, Gfo/Idh/MocA family-9e-5At3g20790oxidoreductase family proteinO.I.H.G.S.X.
0.5674.40.95Zm.5645.1.A1_atAI629785--2e-6At5g24710-O.I.H.G.S.X.
0.5469.80.95Zm.14689.1.S1_atBM341363hypothetical protein LOC100277287-7e-7At2g43180catalyticO.I.H.G.S.X.
0.5369.10.94Zm.13962.1.S1_atCO528594334B7.2 protein-9e-3At2g15860unknown proteinO.I.H.G.S.X.
0.5166.40.95Zm.10346.2.A1_a_atAI712193--2e+0At4g33690unknown proteinO.I.H.G.S.X.
0.5166.40.96Zm.1855.1.A1_atCO520028--5e-2At2g03230-O.I.H.G.S.X.
0.4961.90.95Zm.5578.2.S1_a_atBM380773hypothetical protein LOC100193656-1e-4At5g48335unknown proteinO.I.H.G.S.X.
0.4556.40.95Zm.9082.2.S1_atBQ619513--3e-10At2g25070protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4352.80.96Zm.4743.1.S1_atAI738395--7e+0At5g28463unknown proteinO.I.H.G.S.X.
0.4251.30.95Zm.529.1.A1_atAF297045.1homocysteine S-methyltransferase-2-6e-5At3g63250HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.4149.70.96Zm.11944.1.A1_atCK826733transcription factor RF2b-3e-3At1g43700VIP1 (VIRE2-INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.3336.00.95Zm.8232.1.A1_atCF623743hypothetical protein LOC100191804-4e-1At1g02405proline-rich family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.698.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM253272ZM_4.5d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
5.797.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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