Co-expression analysis

Gene ID Zm.6703.1.A1_at
Gene name hypothetical protein LOC100273224
Homology with ArabidopsisSimilar to At2g01120: ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4) (HF=1e+0)
Module size 6 genes
NF 0.53
%ile 69.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.95Zm.6703.1.A1_atCA398710hypothetical protein LOC100273224-1e+0At2g01120ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4)O.I.H.G.S.X.
0.8395.60.95Zm.853.1.A1_atAI395965hypothetical protein LOC100276013-2e-12At4g01150unknown proteinO.I.H.G.S.X.
0.7389.90.96Zm.3570.1.A1_atBG840178--6e-1At1g54260histone H1/H5 family proteinO.I.H.G.S.X.
0.6785.80.95Zm.3569.1.A1_atCO518726hypothetical protein LOC100280101-5e+0At3g55600-O.I.H.G.S.X.
0.6785.80.96Zm.3571.1.S1_atBG265645Hypothetical protein LOC100193516-4e+0At4g17030ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)O.I.H.G.S.X.
0.136.80.95Zm.16828.2.S1_a_atCF632030amelogenin precursor like protein-5e+0Atcg01120-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.499.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.598.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage