Co-expression analysis

Gene ID Zm.667.1.A1_at
Gene name alpha-expansin 3
Homology with ArabidopsisSimilar to At1g20190: ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) (HF=1e-7)
Module size 6 genes
NF 0.28
%ile 24.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.96Zm.667.1.A1_atAF332171.1alpha-expansin 3-1e-7At1g20190ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)O.I.H.G.S.X.
0.6785.80.96Zm.4128.1.S1_a_atAF545814.1SET domain protein 110-5e-2At3g59960ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4)O.I.H.G.S.X.
0.2216.90.96Zm.13565.1.A1_a_atAY107994.1PIT1-1e-1At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.2014.20.96Zm.8100.1.A1_atAY107723.1hypothetical protein LOC100192082-4e-2At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)O.I.H.G.S.X.
0.1811.60.96Zm.15650.1.A1_atCD436607pyrophosphate-energized vacuolar membrane proton pump-2e-6At1g15690AVP1O.I.H.G.S.X.
0.158.60.96Zm.4226.1.A1_atAW054152--9e-9At5g51070ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
4.696.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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