Co-expression analysis

Gene ID Zm.6653.1.S1_at
Gene name hypothetical protein LOC100274393
Homology with ArabidopsisSimilar to At5g54680: ILR3 (iaa-leucine resistant3) (HF=6e-4)
Module size 6 genes
NF 0.42
%ile 48.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.93Zm.6653.1.S1_atCA404358hypothetical protein LOC100274393-6e-4At5g54680ILR3 (iaa-leucine resistant3)O.I.H.G.S.X.
0.5571.60.93Zm.1927.1.A1_atCF623973--7e-1At2g47050invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5065.70.94Zm.11621.1.A1_x_atBG836316diphthamide biosynthesis protein 3-6e+0At4g24130unknown proteinO.I.H.G.S.X.
0.4759.90.93Zm.2822.1.A1_atAW042274endo-1,4-beta-glucanase Cel1-3e-1At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)O.I.H.G.S.X.
0.4251.30.92Zm.18859.1.A1_atCO5293663-alpha-L-fucosyltransferase /// core alpha 1,3-fucosyltransferase-5e+0At3g17980C2 domain-containing proteinO.I.H.G.S.X.
0.169.40.93Zm.16861.2.S1_a_atAW498347hypothetical protein LOC100194388 /// L-ascorbate oxidase-7e-4At1g55570sks12 (SKU5 Similar 12)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.698.3GSM258206W22 11-day seedling aerial tissue biological replicate 3GSE10237Gene expression variation among eight maize inbredsLink to GEO
7.697.9GSM320440protocol: mRNA - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM253247ZM_12h_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.995.7GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.795.4GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM206314Upper pulvinus 15 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.194.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM206326Upper pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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