Co-expression analysis

Gene ID Zm.6590.1.A1_at
Gene name Hypothetical protein LOC100191320
Homology with ArabidopsisSimilar to At5g20890: chaperonin, putative (HF=4e-114)
Module size 7 genes
NF 0.62
%ile 83.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.98Zm.6590.1.A1_atAY108493.1Hypothetical protein LOC100191320-4e-114At5g20890chaperonin, putativeO.I.H.G.S.X.
0.6785.80.98Zm.14400.1.S1_atAW000473hypothetical protein LOC100191706-8e-52At4g02720unknown proteinO.I.H.G.S.X.
0.6785.80.98Zm.6054.1.A1_atAW497492--3e+0At5g25490zinc finger (Ran-binding) family proteinO.I.H.G.S.X.
0.6785.80.98Zm.14489.1.S1_atBQ527929MFS18 protein-1e+0At5g6751060S ribosomal protein L26 (RPL26B)O.I.H.G.S.X.
0.6381.10.98Zm.5517.1.A1_atBE051194hypothetical protein LOC100273563-2e-1At1g15740leucine-rich repeat family proteinO.I.H.G.S.X.
0.5775.10.98Zm.4369.2.S1_atCF016250--5e+0At2g37590Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.3844.20.98Zm.12244.2.S1_x_atAI668243--9e-1At5g46940invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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