Co-expression analysis

Gene ID Zm.6588.1.A1_at
Gene name hypothetical protein LOC100192010
Homology with ArabidopsisSimilar to At1g78630: emb1473 (embryo defective 1473) (HF=5e-23)
Module size 6 genes
NF 0.67
%ile 89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.95Zm.6588.1.A1_atBM080221hypothetical protein LOC100192010-5e-23At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.8094.00.95Zm.3518.1.A1_atBM337627--1e+0At2g22000PROPEP6 (Elicitor peptide 6 precursor)O.I.H.G.S.X.
0.7389.90.94Zm.11730.1.S1_atBM380273hypothetical protein LOC100272845-2e-26At4g38970fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.6785.80.94Zm.2393.1.A1_atBM268973hypothetical protein LOC100273606-1e-1At1g36060AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.4759.90.95Zm.6567.1.A1_atBM072999--2e+0At5g41030TCP family transcription factor, putativeO.I.H.G.S.X.
0.3538.90.94Zm.5850.1.A1_atCF623894--2e-7At4g04910NSF (N-ethylmaleimide sensitive factor)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.198.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1613645_at, orthologous to the query gene, Zm.6588.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.81613645_atAt1g78630hypothetical protein LOC100248623-7e-55At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.8093.61622813_a_atAt1g78630hypothetical protein LOC100245386-4e-11At1g62780unknown proteinO.I.H.G.S.X.
0.6787.91611595_s_atAt1g78630hypothetical protein LOC100245386-4e-11At1g62780unknown proteinO.I.H.G.S.X.
0.6081.91622348_s_atAt1g78630hypothetical protein LOC100248623-1e-34At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.5375.21614317_atAt1g78630hypothetical protein LOC100245459-2e-2At4g37230oxygen-evolving enhancer protein, chloroplast, putative / 33 kDa subunit of oxygen evolving system of photosystem II, putativeO.I.H.G.S.X.
0.2327.51615609_atAt1g78630hypothetical protein LOC100268043-1e-11At3g25920RPL15O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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