Co-expression analysis

Gene ID Zm.6551.1.A1_at
Gene name phytosulfokines 2
Homology with ArabidopsisSimilar to At3g17160: unknown protein (HF=2e+0)
Module size 13 genes
NF 0.29
%ile 26.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.93Zm.6551.1.A1_atAI461518phytosulfokines 2-2e+0At3g17160unknown proteinO.I.H.G.S.X.
0.5775.10.96Zm.7150.3.A1_x_atAY109249.1--2e+0At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)O.I.H.G.S.X.
0.5267.30.95Zm.1375.1.S1_atBF729129--2e-1At3g1874060S ribosomal protein L30 (RPL30C)O.I.H.G.S.X.
0.3742.30.96Zm.13843.1.A1_atAY104026.1hypothetical protein LOC100194177-6e-3At3g59660C2 domain-containing protein / GRAM domain-containing proteinO.I.H.G.S.X.
0.3641.30.96Zm.5710.1.S1_atCF014718charged multivesicular body protein 2b-2e-10At1g03950VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3)O.I.H.G.S.X.
0.3641.30.95Zm.3601.1.S1_atAY110672.1--7e+0At4g26170unknown proteinO.I.H.G.S.X.
0.2724.60.96Zm.5199.1.A1_atAI612393hypothetical protein LOC100191274-7e-3At5g01340mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.2521.30.94Zm.17471.1.S1_atCK368008--1e+0At4g32590ferredoxin-relatedO.I.H.G.S.X.
0.2419.80.97Zm.15513.1.S1_atAW330819--8e-2At5g58190ECT10O.I.H.G.S.X.
0.2115.50.95Zm.13844.1.A1_atAY104009.1hypothetical protein LOC100276510-4e+0At4g27890nuclear movement family proteinO.I.H.G.S.X.
0.1811.60.95Zm.201.1.A1_atL16798.1class I acidic chitinase-8e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.147.70.94RPTR-Zm-A06498-1_atRPTR-Zm-A06498-1---O.I.H.G.S.X.
0.104.60.95Zm.7095.1.A1_a_atCK371352hypothetical protein LOC100194044-7e-9At3g4503040S ribosomal protein S20 (RPS20A)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.498.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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