Co-expression analysis

Gene ID	Zm.6538.1.A1_at
Gene name	stress-related protein
Homology with Arabidopsis	Similar to Atmg00270: - (HF=7e+0)
Module size	9 genes
NF	0.45
%ile	54.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	61.3	0.96	Zm.6538.1.A1_at	CK348062	stress-related protein	-	7e+0	Atmg00270	-	O.I.	H.G.	S.X.	Please select
0.76	91.1	0.97	Zm.4011.1.S1_at	AY112578.1	-	-	3e-54	At5g20570	RBX1 (RING-BOX 1)	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.97	Zm.7463.1.A1_at	BM078503	hypothetical protein LOC100276250	-	2e+0	At1g21090	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.10293.1.S1_at	AY110737.1	light-inducible protein CPRF-2	-	6e-1	At3g50651	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.97	Zm.6329.1.A1_at	AI834129	-	-	1e-1	At5g24313	unknown protein	O.I.	H.G.	S.X.	Please select
0.37	42.3	0.97	Zm.2660.1.A1_at	AW066755	hypothetical protein LOC100194122	-	3e-1	At3g19180	ARC6H	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.2614.2.S1_at	CD436098	-	-	2e+0	At5g17930	binding / protein binding	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.5995.2.S1_a_at	AI666102	-	-	2e+0	At4g14385	-	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	Zm.6228.1.A1_at	AI739920	-	-	1e+0	At1g64370	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.5	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.1	90.8	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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